RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 TADA1Q96BN2 335 aa9.98□□□□□ -0.81
PTPRM-203ENST00000400060 SEZ6LQ9BYH1 1024 aa9.98□□□□□ -0.81
PTPRM-203ENST00000400060 PCDHB16Q9NRJ7 776 aa9.98□□□□□ -0.81
PTPRM-203ENST00000400060 INIPQ9NRY2 104 aa9.98□□□□□ -0.81
PTPRM-203ENST00000400060 UBP1Q9NZI7 540 aa9.98□□□□□ -0.81
PTPRM-203ENST00000400060 NOCTQ9UK39 431 aaKnown RBP9.98□□□□□ -0.81
PTPRM-203ENST00000400060 E7ESA3 106 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 NPPAP01160 153 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 SERPINF2P08697 491 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 NR4A2P43354 598 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 FGD3Q5JSP0 725 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 RRM2BQ7LG56 351 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 DENND6AQ8IWF6 608 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 CPSF7Q8N684 471 aaKnown RBP9.97□□□□□ -0.81
PTPRM-203ENST00000400060 STON2Q8WXE9 905 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 TFAP2CQ92754 450 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 RIPOR3Q96MK2 946 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 FAM83DQ9H4H8 585 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 WDR6Q9NNW5 1121 aaKnown RBP9.97□□□□□ -0.81
PTPRM-203ENST00000400060 EIF2B3Q9NR50 452 aaKnown RBP9.97□□□□□ -0.81
PTPRM-203ENST00000400060 EXD2Q9NVH0 621 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 HSFX1Q9UBD0 423 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 HMGXB4Q9UGU5 601 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 OAZ3Q9UMX2 235 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 HSPB11Q9Y547 144 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 DLGAP1O14490 977 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 STX11O75558 287 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 RNASEH2AO75792 299 aaKnown RBP9.97□□□□□ -0.81
PTPRM-203ENST00000400060 HMGN1P05114 100 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 CYP2F1P24903 491 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 PSMA1P25786 263 aaKnown RBP9.97□□□□□ -0.81
PTPRM-203ENST00000400060 CDKN2BP42772 138 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 STARP49675 285 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 ARPP19P56211 112 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 POU4F1Q01851 419 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 GALNT1Q10472 559 aaPredicted RBP9.97□□□□□ -0.81
PTPRM-203ENST00000400060 HIST2H2ACQ16777 129 aaPredicted RBP9.97□□□□□ -0.81
PTPRM-203ENST00000400060 FAM187BQ17R55 369 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 SV2AQ7L0J3 742 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 FAM20CQ8IXL6 584 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 ZZZ3Q8IYH5 903 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 SRFBP1Q8NEF9 429 aaKnown RBP9.97□□□□□ -0.81
PTPRM-203ENST00000400060 OR6Q1Q8NGQ2 317 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 DEDD2Q8WXF8 326 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 TMIGD2Q96BF3 282 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 IDI2Q9BXS1 227 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 ERAP1Q9NZ08 941 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 NYAP2Q9P242 653 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 AASSQ9UDR5 926 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 TRAF6Q9Y4K3 522 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 CNTNAP2Q9UHC6 1331 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 FAM159BA6NKW6 160 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 ATE1O95260 518 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 ZNF682O95780 498 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 TNNI3P19429 210 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 PRKCHP24723 683 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 HOXD11P31277 338 aaPredicted RBP9.97□□□□□ -0.81
PTPRM-203ENST00000400060 DDOSTP39656 456 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 CACNB3P54284 484 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 RAB10P61026 200 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 NPTX1Q15818 432 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 MON1BQ7L1V2 547 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 EFHBQ8N7U6 833 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 APBA2Q99767 749 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 ZNF670Q9BS34 389 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 SPATA9Q9BWV2 254 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 KCNK13Q9HB14 408 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 TMEM5Q9Y2B1 443 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 PRSS51A0A1B0GVH4 220 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 GSAPA4D1B5 854 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 RGS13O14921 159 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 HMBSP08397 361 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 CKMT2P17540 419 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 ATP6V1E1P36543 226 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 AVPR1AP37288 418 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 CD83Q01151 205 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 FADDQ13158 208 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 DLG2Q15700 870 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 GLYATQ6IB77 296 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 CASP12Q6UXS9 341 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 TMEM17Q86X19 198 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 CBWD2Q8IUF1 395 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 GALNT11Q8NCW6 608 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 OR56A4Q8NGH8 313 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 TEX47Q8TBZ9 253 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 TSPEARQ8WU66 669 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 DIRAS2Q96HU8 199 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 MARK4Q96L34 752 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 FUNDC2Q9BWH2 189 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 WDR55Q9H6Y2 383 aaPredicted RBP9.97□□□□□ -0.81
PTPRM-203ENST00000400060 ANKRA2Q9H9E1 313 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 PAK1IP1Q9NWT1 392 aaPredicted RBP9.97□□□□□ -0.81
PTPRM-203ENST00000400060 MED11Q9P086 117 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 H2AFY2Q9P0M6 372 aaPredicted RBP9.97□□□□□ -0.81
PTPRM-203ENST00000400060 RGS17Q9UGC6 210 aaPredicted RBP9.97□□□□□ -0.81
PTPRM-203ENST00000400060 CNTNAP4Q9C0A0 1308 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 BCL9LQ86UU0 1499 aa9.97□□□□□ -0.81
PTPRM-203ENST00000400060 C2orf74A8MZ97 194 aa9.96□□□□□ -0.81
PTPRM-203ENST00000400060 WDPCPO95876 746 aa9.96□□□□□ -0.81
PTPRM-203ENST00000400060 SULT1E1P49888 294 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms