RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 SEZ6LQ9BYH1 1024 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 RNF39Q9H2S5 420 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 DPEP3Q9H4B8 488 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 EVLQ9UI08 416 aaPredicted RBP17.09■□□□□ 0.33
PTPRA-205ENST00000399903 MKI67P46013 3256 aaKnown RBP17.09■□□□□ 0.33
PTPRA-205ENST00000399903 APOA4P06727 396 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 BDNFP23560 247 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 GALNT2Q10471 571 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 SELENBP1Q13228 472 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 NAB1Q13506 487 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 RABL3Q5HYI8 236 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 TBPL2Q6SJ96 375 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 CEP97Q8IW35 865 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 CLIP3Q96DZ5 547 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 USP22Q9UPT9 525 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 SLC35E2BP0CK96 405 aa17.08■□□□□ 0.33
PTPRA-205ENST00000399903 MZF1P28698 734 aaPredicted RBP17.08■□□□□ 0.33
PTPRA-205ENST00000399903 SLC6A3Q01959 620 aa17.08■□□□□ 0.33
PTPRA-205ENST00000399903 TMTC4Q5T4D3 741 aa17.08■□□□□ 0.33
PTPRA-205ENST00000399903 CLEC14AQ86T13 490 aa17.08■□□□□ 0.33
PTPRA-205ENST00000399903 SMG8Q8ND04 991 aaKnown RBP17.08■□□□□ 0.33
PTPRA-205ENST00000399903 TINF2Q9BSI4 451 aa17.08■□□□□ 0.33
PTPRA-205ENST00000399903 IL22Q9GZX6 179 aa17.08■□□□□ 0.33
PTPRA-205ENST00000399903 KATNBL1Q9H079 304 aa17.08■□□□□ 0.33
PTPRA-205ENST00000399903 CD300AQ9UGN4 299 aa17.08■□□□□ 0.33
PTPRA-205ENST00000399903 SCN1AP35498 2009 aa17.08■□□□□ 0.33
PTPRA-205ENST00000399903 A0A0J9YYE9 177 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 H0Y858 1186 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 SLC22A2O15244 555 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 LDLRP01130 860 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 SHMT2P34897 504 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 TMC5Q6UXY8 1006 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 CYS1Q717R9 158 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 CUZD1Q86UP6 607 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 CENPLQ8N0S6 344 aaPredicted RBP17.08■□□□□ 0.32
PTPRA-205ENST00000399903 MFSD2AQ8NA29 543 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 OR6B3Q8NGW1 331 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 TMEM40Q8WWA1 233 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 DACH2Q96NX9 599 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 MROQ9BYG7 248 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 SCHIP1Q9P0W5 487 aaPredicted RBP17.08■□□□□ 0.32
PTPRA-205ENST00000399903 TMEM181Q9P2C4 612 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 NME7Q9Y5B8 376 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 SNX5Q9Y5X3 404 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 ZCWPW2A0A1B0GU75 182 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 ARPC2O15144 300 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 MBL2P11226 248 aaPredicted RBP17.08■□□□□ 0.32
PTPRA-205ENST00000399903 STMN1P16949 149 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 KCNA5P22460 613 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 NR2C2P49116 596 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 HLCSP50747 726 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 APLP1P51693 650 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 ENPEPQ07075 957 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 ITIH5Q86UX2 942 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 TBCBQ99426 244 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 DOK1Q99704 481 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 OSBPL2Q9H1P3 480 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 AGPAT4Q9NRZ5 378 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 FLRT1Q9NZU1 646 aa17.08■□□□□ 0.32
PTPRA-205ENST00000399903 MTF2Q9Y483 593 aaPredicted RBP17.08■□□□□ 0.32
PTPRA-205ENST00000399903 TMBIM6P55061 237 aa17.07■□□□□ 0.32
PTPRA-205ENST00000399903 COPZ1P61923 177 aa17.07■□□□□ 0.32
PTPRA-205ENST00000399903 TRIM32Q13049 653 aa17.07■□□□□ 0.32
PTPRA-205ENST00000399903 MEP1AQ16819 746 aa17.07■□□□□ 0.32
PTPRA-205ENST00000399903 SMUG1Q53HV7 270 aa17.07■□□□□ 0.32
PTPRA-205ENST00000399903 ZNF773Q6PK81 442 aa17.07■□□□□ 0.32
PTPRA-205ENST00000399903 HEXDCQ8WVB3 486 aa17.07■□□□□ 0.32
PTPRA-205ENST00000399903 ATXN3LQ9H3M9 355 aa17.07■□□□□ 0.32
PTPRA-205ENST00000399903 RAD54BQ9Y620 910 aa17.07■□□□□ 0.32
PTPRA-205ENST00000399903 DICER1Q9UPY3 1922 aaKnown RBP17.07■□□□□ 0.32
PTPRA-205ENST00000399903 AHSGP02765 367 aa17.07■□□□□ 0.32
PTPRA-205ENST00000399903 TNFAIP2Q03169 654 aa17.07■□□□□ 0.32
PTPRA-205ENST00000399903 FBXO48Q5FWF7 155 aa17.07■□□□□ 0.32
PTPRA-205ENST00000399903 ANKRD13BQ86YJ7 626 aa17.07■□□□□ 0.32
PTPRA-205ENST00000399903 STYXQ8WUJ0 223 aa17.07■□□□□ 0.32
PTPRA-205ENST00000399903 RNF38Q9H0F5 515 aa17.07■□□□□ 0.32
PTPRA-205ENST00000399903 ADAMTS10Q9H324 1103 aa17.07■□□□□ 0.32
PTPRA-205ENST00000399903 TP63Q9H3D4 680 aaPredicted RBP17.07■□□□□ 0.32
PTPRA-205ENST00000399903 DDX28Q9NUL7 540 aaKnown RBP17.07■□□□□ 0.32
PTPRA-205ENST00000399903 FAM95CA0A1B0GW59 222 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 H3BMM5 538 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 ZBTB24O43167 697 aaPredicted RBP17.06■□□□□ 0.32
PTPRA-205ENST00000399903 JRKO75564 520 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 INTS11Q5TA45 600 aaKnown RBP17.06■□□□□ 0.32
PTPRA-205ENST00000399903 OR7A2PQ8NGA2 310 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 TOP1MTQ969P6 601 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 VPS33AQ96AX1 596 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 TMEM74Q96NL1 305 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 NT5C1AQ9BXI3 368 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 BCO2Q9BYV7 579 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 RRAGCQ9HB90 399 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 GBA2Q9HCG7 927 aaPredicted RBP17.06■□□□□ 0.32
PTPRA-205ENST00000399903 TMEM9Q9P0T7 183 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 PIN4Q9Y237 131 aaKnown RBP17.06■□□□□ 0.32
PTPRA-205ENST00000399903 A0A1W2PQ67 120 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 SYCE1LA8MT33 242 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 DEAF1O75398 565 aaPredicted RBP17.06■□□□□ 0.32
PTPRA-205ENST00000399903 INMTO95050 263 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 MFN2O95140 757 aa17.06■□□□□ 0.32
PTPRA-205ENST00000399903 RASAL1O95294 804 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms