RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 GPC6Q9Y625 555 aaPredicted RBP9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 GMNNO75496 209 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 LINC00032P0C843 101 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 BMP2P12643 396 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 TCF3P15923 654 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 MYF6P23409 242 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 AKAP5P24588 427 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 SLC1A2P43004 574 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 RPS9P46781 194 aaKnown RBP9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 IST1P53990 364 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 IL1RL1Q01638 556 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 SLC26A9Q7LBE3 791 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 STK32CQ86UX6 486 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 RALGPS2Q86X27 583 aaPredicted RBP9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 FUNDC1Q8IVP5 155 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 AFAP1L2Q8N4X5 818 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 ANKFN1Q8N957 763 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 PCYOX1LQ8NBM8 494 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 SNX19Q92543 992 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 ASB16Q96NS5 453 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 HNRNPABQ99729 332 aaKnown RBP9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 C9orf16Q9BUW7 83 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 FICDQ9BVA6 458 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 LRRC4Q9HBW1 653 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 CD300AQ9UGN4 299 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 TNFSF13BQ9Y275 285 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 BPTFQ12830 3046 aa9.89□□□□□ -0.83
PTCHD4-202ENST00000398738 A8MT66 165 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 ARPC2O15144 300 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 ESRRBO95718 433 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 TXNP10599 105 aaKnown RBP9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 ATP5F1P24539 256 aaPredicted RBP9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 IDUAP35475 653 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 PCYT1AP49585 367 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 GRB7Q14451 532 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 ARHGAP36Q6ZRI8 547 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 PIWIL4Q7Z3Z4 852 aaKnown RBP9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 FBXO16Q8IX29 292 aaPredicted RBP9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 PSD4Q8NDX1 1056 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 OR6P1Q8NGX9 317 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 SEPT8Q92599 483 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 HSH2DQ96JZ2 352 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 MED10Q9BTT4 135 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 LHPPQ9H008 270 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 PDZD7Q9H5P4 517 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 AKTIPQ9H8T0 292 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 MYOZ2Q9NPC6 264 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 CCM2LQ9NUG4 571 aaPredicted RBP9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 SMPD3Q9NY59 655 aaPredicted RBP9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 TMEM181Q9P2C4 612 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 POU2F3Q9UKI9 436 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 RAD54BQ9Y620 910 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 BEST1O76090 585 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 ALDOCP09972 364 aaKnown RBP9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 PROZP22891 400 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 ADSLP30566 484 aaPredicted RBP9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 ATICP31939 592 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 MATKP42679 507 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 SLC36A3Q495N2 470 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 SLC2A7Q6PXP3 512 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 FAM83AQ86UY5 434 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 ERO1BQ86YB8 467 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 SDCCAG3Q96C92 435 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 CENPNQ96H22 339 aaPredicted RBP9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 ZMAT2Q96NC0 199 aaKnown RBP9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 MIR1-1HGQ9H1L0 117 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 CCDC68Q9H2F9 335 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 RAD21L1Q9H4I0 556 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 EIF2B3Q9NR50 452 aaKnown RBP9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 SLAMF8Q9P0V8 285 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 SPATA7Q9P0W8 599 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 CACNG4Q9UBN1 327 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 ZNF229Q9UJW7 825 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 ERGIC3Q9Y282 383 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 CRYL1Q9Y2S2 319 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 CITO14578 2027 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 LOXHD1Q8IVV2 1947 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 ZBTB42B2RXF5 422 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 UBFD1O14562 309 aaKnown RBP9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 DYNC1LI2O43237 492 aaPredicted RBP9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 CNOT3O75175 753 aaKnown RBP9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 CAPN3P20807 821 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 CAPGP40121 348 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 GLUD2P49448 558 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 CREB5Q02930 508 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 OCA2Q04671 838 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 CLCQ05315 142 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 CXCL9Q07325 125 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 CDH17Q12864 832 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 TRAP1Q12931 704 aaKnown RBP9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 SPCS2Q15005 226 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 PAGE2BQ5JRK9 111 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 MFSD4BQ5TF39 518 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 ANKRD34AQ69YU3 496 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 NIPAL1Q6NVV3 410 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 DLK2Q6UY11 383 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 DSG4Q86SJ6 1040 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 ZNF295-AS1Q8N0V1 137 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 TRPC4APQ8TEL6 797 aa9.88□□□□□ -0.83
PTCHD4-202ENST00000398738 NUDT8Q8WV74 236 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms