RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 DNTTIP2Q5QJE6 756 aaKnown RBP3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 KRT39Q6A163 491 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 SLC9A4Q6AI14 798 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 NEK5Q6P3R8 708 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 TMEM88Q6PEY1 159 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 MOXD1Q6UVY6 613 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 NHLRC1Q6VVB1 395 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 TRIM72Q6ZMU5 477 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 DOK3Q7L591 496 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 TAOK1Q7L7X3 1001 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 ARMC9Q7Z3E5 817 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 TMPRSS9Q7Z410 1059 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 HAUS6Q7Z4H7 955 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 ABI3BPQ7Z7G0 1075 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 NBPF5PQ86XG9 351 aaPredicted RBP3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 MFN1Q8IWA4 741 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 IZUMO1Q8IYV9 350 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 VPS52Q8N1B4 723 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 KDM8Q8N371 416 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 HJURPQ8NCD3 748 aaPredicted RBP3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 RNF169Q8NCN4 708 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 SETD9Q8NE22 299 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 DBF4BQ8NFT6 615 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 NEK11Q8NG66 645 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 OR52L2PQ8NGH6 319 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 OR10S1Q8NGN2 331 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 CFAP61Q8NHU2 1237 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 KIAA1524Q8TCG1 905 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 CACTINQ8WUQ7 758 aaKnown RBP3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 GLMPQ8WWB7 406 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 DNASE1L2Q92874 299 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 TUBGCP3Q96CW5 907 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 MRPL38Q96DV4 380 aaKnown RBP3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 DTNBP1Q96EV8 351 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 WDYHV1Q96HA8 205 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 HES6Q96HZ4 224 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 CLMNQ96JQ2 1002 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 ZNF558Q96NG5 402 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 MPHOSPH9Q99550 1183 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 INPP5KQ9BT40 448 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 NUAK2Q9H093 628 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 RWDD1Q9H446 243 aaPredicted RBP3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 CDCP1Q9H5V8 836 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 TM9SF3Q9HD45 589 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 IL23AQ9NPF7 189 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 PIH1D3Q9NQM4 214 aaKnown RBP3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 DNAJC11Q9NVH1 559 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 ATAD3AQ9NVI7 634 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 AURKAIP1Q9NWT8 199 aaPredicted RBP3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 BABAM1Q9NWV8 329 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 AIPL1Q9NZN9 384 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 SPASTQ9UBP0 616 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 NKX1-2Q9UD57 310 aaPredicted RBP3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 CNOT8Q9UFF9 292 aaKnown RBP3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 IL17BQ9UHF5 180 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 DDX25Q9UHL0 483 aaKnown RBP3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 SERTAD3Q9UJW9 196 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 PTBP2Q9UKA9 531 aaKnown RBP3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 FBXW2Q9UKT8 454 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 ITGA11Q9UKX5 1188 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 SSX2IPQ9Y2D8 614 aa3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 TDRKHQ9Y2W6 561 aaKnown RBP3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 CAB39Q9Y376 341 aaPredicted RBP3.28□□□□□ -1.88
RPS4XP3-201ENST00000398541 KDRP35968 1356 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 SPATA31A3Q5VYP0 1347 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 KRTAP23-1A1A580 65 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 UBE2QL1A1L167 161 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 WIPF3A6NGB9 483 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 ZAR1LA6NP61 321 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 MAGEB17A8MXT2 336 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 H0YC42 278 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 RASGRF2O14827 1237 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 EIF3DO15371 548 aaKnown RBP eCLIP3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 HOXA3O43365 443 aaPredicted RBP3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 KIF5CO60282 957 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 RECQL4O94761 1208 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 NKX2-2O95096 273 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 AKR7A3O95154 331 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 KCNK5O95279 499 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 DIRAS3O95661 229 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 BCL10O95999 233 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 TGFAP01135 160 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 HLA-DOAP06340 250 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 CCDC192P0DO97 292 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 ACTN1P12814 892 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 KRT5P13647 590 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 PKMP14618 531 aaKnown RBP3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 ETS1P14921 441 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 ITIH1P19827 911 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 MATN1P21941 496 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 CD27P26842 260 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 CXCR5P32302 372 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 CTNNB1P35222 781 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 IGHMBP2P38935 993 aaKnown RBP3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 MDH1P40925 334 aaKnown RBP3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 ASMTP46597 345 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 ANXA11P50995 505 aaKnown RBP3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 PDE1AP54750 535 aa3.27□□□□□ -1.89
RPS4XP3-201ENST00000398541 COG7P83436 770 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms