RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 LRP8Q14114 963 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 TIGD2Q4W5G0 525 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 PEX5LQ8IYB4 626 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 PACRGLQ8N7B6 248 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 MFSD2AQ8NA29 543 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 FAM110BQ8TC76 370 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 DUS3LQ96G46 650 aaKnown RBP16■□□□□ 0.15
CHMP1A-201ENST00000397901 ZNF419Q96HQ0 510 aaPredicted RBP16■□□□□ 0.15
CHMP1A-201ENST00000397901 MRPL57Q9BQC6 102 aaKnown RBP16■□□□□ 0.15
CHMP1A-201ENST00000397901 TINF2Q9BSI4 451 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 TMEM30AQ9NV96 361 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 TRIM24O15164 1050 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 MYO1DO94832 1006 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 CKMT2P17540 419 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 ATP5F1P24539 256 aaPredicted RBP15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 ARCN1P48444 511 aaKnown RBP15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 HCAR3P49019 387 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 ATP6V0D1P61421 351 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 RBM20Q5T481 1227 aaKnown RBP15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 HMBOX1Q6NT76 420 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 LIMS2Q7Z4I7 341 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 ZBTB46Q86UZ6 589 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 PPHLN1Q8NEY8 458 aaKnown RBP15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 TMEM40Q8WWA1 233 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 STON2Q8WXE9 905 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 SMOQ99835 787 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 CRTAC1Q9NQ79 661 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 CNOT6Q9ULM6 557 aaKnown RBP15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 ATP11BQ9Y2G3 1177 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 TIMM13Q9Y5L4 95 aaPredicted RBP15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 GPC4O75487 556 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 GMNNO75496 209 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 TIPRLO75663 272 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 TSPAN8P19075 237 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 CHRNA4P43681 627 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 AIF1P55008 147 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 SQLEQ14534 574 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 INTS6LQ5JSJ4 861 aaKnown RBP15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 KCTD8Q6ZWB6 473 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 CHSY3Q70JA7 882 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 CNTN4Q8IWV2 1026 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 ARRDC4Q8NCT1 418 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 OR6J1Q8NGC5 347 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 RNF34Q969K3 372 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 PHF21BQ96EK2 531 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 CEP44Q9C0F1 390 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 SIK2Q9H0K1 926 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 ABHD16BQ9H3Z7 469 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 SPAG4Q9NPE6 437 aa15.99■□□□□ 0.15
CHMP1A-201ENST00000397901 ATP6AP2A0A1C7CYW4 349 aa15.98■□□□□ 0.15
CHMP1A-201ENST00000397901 CLDN25C9JDP6 229 aa15.98■□□□□ 0.15
CHMP1A-201ENST00000397901 SOCS2O14508 198 aa15.98■□□□□ 0.15
CHMP1A-201ENST00000397901 MRASO14807 208 aa15.98■□□□□ 0.15
CHMP1A-201ENST00000397901 PMPCBO75439 489 aa15.98■□□□□ 0.15
CHMP1A-201ENST00000397901 ATP6AP2O75787 350 aa15.98■□□□□ 0.15
CHMP1A-201ENST00000397901 KRT75O95678 551 aa15.98■□□□□ 0.15
CHMP1A-201ENST00000397901 S100BP04271 92 aaPredicted RBP15.98■□□□□ 0.15
CHMP1A-201ENST00000397901 GNAO1P09471 354 aa15.98■□□□□ 0.15
CHMP1A-201ENST00000397901 DARSP14868 501 aaKnown RBP15.98■□□□□ 0.15
CHMP1A-201ENST00000397901 SELENBP1Q13228 472 aa15.98■□□□□ 0.15
CHMP1A-201ENST00000397901 CUZD1Q86UP6 607 aa15.98■□□□□ 0.15
CHMP1A-201ENST00000397901 TOP6BLQ8N6T0 577 aa15.98■□□□□ 0.15
CHMP1A-201ENST00000397901 PTPN18Q99952 460 aa15.98■□□□□ 0.15
CHMP1A-201ENST00000397901 HERC2P3Q9BVR0 1158 aa15.98■□□□□ 0.15
CHMP1A-201ENST00000397901 ZFYVE28Q9HCC9 887 aa15.98■□□□□ 0.15
CHMP1A-201ENST00000397901 IGSF5Q9NSI5 407 aa15.98■□□□□ 0.15
CHMP1A-201ENST00000397901 SMOXQ9NWM0 555 aa15.98■□□□□ 0.15
CHMP1A-201ENST00000397901 YWHAQP27348 245 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 PRKCQQ04759 706 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 MAPRE2Q15555 327 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 ZNF789Q5FWF6 425 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 C6orf10Q5SRN2 563 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 PLEKHH3Q7Z736 793 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 NPLOC4Q8TAT6 608 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 DPF3Q92784 378 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 RHOBTB2Q9BYZ6 727 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 AAR2Q9Y312 384 aaKnown RBP15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 TRAF6Q9Y4K3 522 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 MYBPHLA2RUH7 354 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 A8MT66 165 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 AP3B1O00203 1094 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 JRKO75564 520 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 CAPN15O75808 1086 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 CHEK2O96017 543 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 SNRPB2P08579 225 aaKnown RBP15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 BMP2P12643 396 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 CPB1P15086 417 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 LRPAP1P30533 357 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 HPCAL1P37235 193 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 PSMD8P48556 350 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 SLC7A2P52569 658 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 TRAP1Q12931 704 aaKnown RBP15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 FAM110CQ1W6H9 321 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 NOMO2Q5JPE7 1267 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 FAM209AQ5JX71 171 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 IRAK1BP1Q5VVH5 260 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 BTBD8Q5XKL5 378 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 IQSEC1Q6DN90 963 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 CLEC6AQ6EIG7 209 aa15.97■□□□□ 0.15
CHMP1A-201ENST00000397901 DENND5AQ6IQ26 1287 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms