RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 SPO11Q9Y5K1 396 aa19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 SPECC1L-ADORA2AF8WAN1 911 aa19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 COPEO14579 308 aa19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 CCDC22O60826 627 aa19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 KRT38O76015 456 aa19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 UGT2B4P06133 528 aa19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 ASGR2P07307 311 aa19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 ERVK-10P10266 1014 aa19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 CNTFP26441 200 aa19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 GRIA4P48058 902 aa19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 SERPINB9P50453 376 aa19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 ARFIP2P53365 341 aa19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 SMAD1Q15797 465 aaKnown RBP19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 CNGA3Q16281 694 aa19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 GRIN3AQ8TCU5 1115 aa19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 THOC1Q96FV9 657 aaKnown RBP19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 ZNF641Q96N77 438 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 IQCGQ9H095 443 aaKnown RBP19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 RNPEPL1Q9HAU8 725 aa19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 TREX1Q9NSU2 369 aa19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 C20orf96Q9NUD7 363 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 THAP10Q9P2Z0 257 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 ARL5AQ9Y689 179 aa19.35■□□□□ 0.69
PDLIM2-204ENST00000397760 GOLGA8RI6L899 631 aa19.34■□□□□ 0.69
PDLIM2-204ENST00000397760 LDB2O43679 373 aa19.34■□□□□ 0.69
PDLIM2-204ENST00000397760 PAPSS2O95340 614 aaPredicted RBP19.34■□□□□ 0.69
PDLIM2-204ENST00000397760 CRTAMO95727 393 aa19.34■□□□□ 0.69
PDLIM2-204ENST00000397760 PYGBP11216 843 aa19.34■□□□□ 0.69
PDLIM2-204ENST00000397760 BMP1P13497 986 aa19.34■□□□□ 0.69
PDLIM2-204ENST00000397760 HLA-EP13747 358 aa19.34■□□□□ 0.69
PDLIM2-204ENST00000397760 ABL2P42684 1182 aa19.34■□□□□ 0.69
PDLIM2-204ENST00000397760 SERPINB4P48594 390 aa19.34■□□□□ 0.69
PDLIM2-204ENST00000397760 HNRNPA1L2Q32P51 320 aaKnown RBP19.34■□□□□ 0.69
PDLIM2-204ENST00000397760 SERPINA13PQ6UXR4 307 aa19.34■□□□□ 0.69
PDLIM2-204ENST00000397760 GDPD4Q6W3E5 623 aa19.34■□□□□ 0.69
PDLIM2-204ENST00000397760 GLT6D1Q7Z4J2 308 aa19.34■□□□□ 0.69
PDLIM2-204ENST00000397760 MTDHQ86UE4 582 aaKnown RBP19.34■□□□□ 0.69
PDLIM2-204ENST00000397760 ENDOVQ8N8Q3 282 aaKnown RBP19.34■□□□□ 0.69
PDLIM2-204ENST00000397760 CDKL2Q92772 493 aa19.34■□□□□ 0.69
PDLIM2-204ENST00000397760 N4BP2L2Q92802 583 aaPredicted RBP19.34■□□□□ 0.69
PDLIM2-204ENST00000397760 TMEM245Q9H330 911 aa19.34■□□□□ 0.69
PDLIM2-204ENST00000397760 KCTD3Q9Y597 815 aa19.34■□□□□ 0.69
PDLIM2-204ENST00000397760 EDDM13A0A1B0GTR0 161 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 ANTXRLA6NF34 631 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 A8MUI8 341 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 HGSO14964 777 aaPredicted RBP19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 LEFTY1O75610 366 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 HAUS5O94927 633 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 CTPS1P17812 591 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 PAMP19021 973 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 CALB2P22676 271 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 CTHP32929 405 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 PTPRRQ15256 657 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 ARSIQ5FYB1 569 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 EGFLAMQ63HQ2 1017 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 ATG16L1Q676U5 607 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 ZNF449Q6P9G9 518 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 TXNDC11Q6PKC3 985 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 KCNMB4Q86W47 210 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 RASSF3Q86WH2 238 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 ZSWIM9Q86XI8 627 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 FAM13CQ8NE31 585 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 MDGA1Q8NFP4 955 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 SKA1Q96BD8 255 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 ECHDC3Q96DC8 303 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 C7orf26Q96N11 449 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 FAM111AQ96PZ2 611 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 HEBP1Q9NRV9 189 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 IL36AQ9UHA7 158 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 HCN2Q9UL51 889 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 PLLPQ9Y342 182 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 WASF2Q9Y6W5 498 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 PIAS3Q9Y6X2 628 aa19.33■□□□□ 0.69
PDLIM2-204ENST00000397760 UNC80Q8N2C7 3258 aa19.33■□□□□ 0.68
PDLIM2-204ENST00000397760 WDR91A4D1P6 747 aa19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 TRIM49D1C9J1S8 452 aa19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 BUD23O43709 281 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 IL12RB1P42701 662 aa19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 TNFRSF4P43489 277 aa19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 TAF1AQ15573 450 aaPredicted RBP19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 TIFABQ6ZNK6 161 aa19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 LONP2Q86WA8 852 aa19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 RALGPS2Q86X27 583 aaPredicted RBP19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 RFWD2Q8NHY2 731 aa19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 DNASE1L2Q92874 299 aa19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 KLHL32Q96NJ5 620 aa19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 SRPK1Q96SB4 655 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 C8orf33Q9H7E9 229 aaPredicted RBP19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 ZDHHC4Q9NPG8 344 aa19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 HACD3Q9P035 362 aa19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 ZFATQ9P243 1243 aa19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 FAM50BQ9Y247 325 aa19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 A0A0J9YYE9 177 aa19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 AURKAO14965 403 aa19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 VAPBO95292 243 aa19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 TRBC1P01850 177 aa19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 ALPIP09923 528 aa19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 ARCN1P48444 511 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 PUS10Q3MIT2 529 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-204ENST00000397760 HSP90AA5PQ58FG0 334 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms