RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 IDH3BO43837 385 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 TRIM13O60858 407 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 CSPG5O95196 566 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 AP2A1O95782 977 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 PGK1P00558 417 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 ITGB1P05556 798 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 ABCB1P08183 1280 aaPredicted RBP5.03□□□□□ -1.6
SSR1-202ENST00000397511 C7P10643 843 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 GABRB3P28472 473 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 EEF1DP29692 281 aaKnown RBP5.03□□□□□ -1.6
SSR1-202ENST00000397511 MAGEA6P43360 314 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 GLUD2P49448 558 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 LIMK2P53671 638 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 IFITM2Q01629 132 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 NFATC3Q12968 1075 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 KLF10Q13118 480 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 CSHL1Q14406 222 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 MGAT5BQ3V5L5 792 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 PERM1Q5SV97 790 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 BTBD8Q5XKL5 378 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 CXCL17Q6UXB2 119 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 FAM35AQ86V20 835 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 NT5DC4Q86YG4 428 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 SCN4BQ8IWT1 228 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 FAM47BQ8NA70 645 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 ACDQ96AP0 544 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 RCN3Q96D15 328 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 B3GALT6Q96L58 329 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 PTPN18Q99952 460 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 FICDQ9BVA6 458 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 NPLQ9BXD5 320 aaPredicted RBP5.03□□□□□ -1.6
SSR1-202ENST00000397511 FSD1LQ9BXM9 530 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 ANKRD60Q9BZ19 345 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 TRIM8Q9BZR9 551 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 SLC7A5P2Q9GIP4 190 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 WDR12Q9GZL7 423 aaKnown RBP5.03□□□□□ -1.6
SSR1-202ENST00000397511 TP63Q9H3D4 680 aaPredicted RBP5.03□□□□□ -1.6
SSR1-202ENST00000397511 COQ10BQ9H8M1 238 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 SPON1Q9HCB6 807 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 PCDH12Q9NPG4 1184 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 HACD3Q9P035 362 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 MOSPD1Q9UJG1 213 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 A0A0G2JMZ2 1700 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 LRRC37A2A6NM11 1700 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 NRCAMQ92823 1304 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 C7orf72A4D263 438 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 FAM172BPA6NC97 362 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 OR51F1A6NGY5 319 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 HOXA2O43364 376 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 NUAK1O60285 661 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 ICMTO60725 284 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 HMBSP08397 361 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 PIRTP0C851 137 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 ZNF182P17025 639 aaPredicted RBP5.03□□□□□ -1.6
SSR1-202ENST00000397511 TFEBP19484 476 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 ETFBP38117 255 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 DAOAP59103 153 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 PRAMEP78395 509 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 CHRNEQ04844 493 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 IKBKEQ14164 716 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 PTPRCAPQ14761 206 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 RAB39AQ14964 217 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 KYAT1Q16773 422 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 PITRM1Q5JRX3 1037 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 GRTP1Q5TC63 336 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 ZNF470Q6ECI4 717 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 PPP4R4Q6NUP7 873 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 CYP2R1Q6VVX0 501 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 TAC4Q86UU9 113 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 ANKRD13BQ86YJ7 626 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 DCP2Q8IU60 420 aaKnown RBP5.03□□□□□ -1.6
SSR1-202ENST00000397511 MYO1HQ8N1T3 1032 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 TMEM102Q8N9M5 508 aaPredicted RBP5.03□□□□□ -1.6
SSR1-202ENST00000397511 APBB2Q92870 758 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 PBXIP1Q96AQ6 731 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 PABPC5Q96DU9 382 aaKnown RBP5.03□□□□□ -1.6
SSR1-202ENST00000397511 ELMO2Q96JJ3 720 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 TSNARE1Q96NA8 513 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 KLHL5Q96PQ7 755 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 SGIP1Q9BQI5 828 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 ZBED2Q9BTP6 218 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 SEZ6LQ9BYH1 1024 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 HOXD1Q9GZZ0 328 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 ILKAPQ9H0C8 392 aaPredicted RBP5.03□□□□□ -1.6
SSR1-202ENST00000397511 PCDHAC1Q9H158 963 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 MUC3BQ9H195 1237 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 IL1RL2Q9HB29 575 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 TMLHEQ9NVH6 421 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 DNAJC28Q9NX36 388 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 GDAP2Q9NXN4 497 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 ADA2Q9NZK5 511 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 CCDC167Q9P0B6 97 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 KLF15Q9UIH9 416 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 TSR3Q9UJK0 312 aaKnown RBP5.03□□□□□ -1.6
SSR1-202ENST00000397511 ST3GAL5Q9UNP4 418 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 CRYL1Q9Y2S2 319 aa5.03□□□□□ -1.6
SSR1-202ENST00000397511 RANBP2P49792 3224 aaKnown RBP5.03□□□□□ -1.61
SSR1-202ENST00000397511 TRIM64BA6NI03 449 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 A6NL46 340 aa5.02□□□□□ -1.61
SSR1-202ENST00000397511 HACD1B0YJ81 288 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms