RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 CCDC89Q8N998 374 aa21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 NAP1L3Q99457 506 aaPredicted RBP21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 NAPGQ99747 312 aaPredicted RBP21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 APOL2Q9BQE5 337 aa21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 APOOQ9BUR5 198 aa21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 ZFYVE1Q9HBF4 777 aa21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 HOMER3Q9NSC5 361 aa21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 GOLGA6AQ9NYA3 693 aa21.16■□□□□ 0.98
TSPAN4-206ENST00000397408 ZNF185O15231 689 aa21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 YKT6O15498 198 aa21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 EPHA8P29322 1005 aaPredicted RBP21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 ACTN2P35609 894 aa21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 RXRGP48443 463 aa21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 PTK2BQ14289 1009 aa21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 NFATC4Q14934 902 aa21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 ZNF542PQ5EBM4 170 aa21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 RAET1GQ6H3X3 334 aa21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 PNCKQ6P2M8 343 aa21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 MACC1Q6ZN28 852 aa21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 PRUNE1Q86TP1 453 aa21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 KLHDC8BQ8IXV7 354 aa21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 AP2M1Q96CW1 435 aa21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 SRPK1Q96SB4 655 aaKnown RBP21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 AP1M1Q9BXS5 423 aa21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 GPR63Q9BZJ6 419 aa21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 ABCG8Q9H221 673 aa21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 WDR26Q9H7D7 661 aa21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 DNAJC28Q9NX36 388 aa21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 PKD2L2Q9NZM6 624 aa21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 PCDHGB2Q9Y5G2 931 aa21.15■□□□□ 0.98
TSPAN4-206ENST00000397408 CES2O00748 559 aa21.14■□□□□ 0.98
TSPAN4-206ENST00000397408 TM4SF5O14894 197 aa21.14■□□□□ 0.98
TSPAN4-206ENST00000397408 ETS1P14921 441 aa21.14■□□□□ 0.98
TSPAN4-206ENST00000397408 TSHRP16473 764 aa21.14■□□□□ 0.98
TSPAN4-206ENST00000397408 TCP1P17987 556 aaKnown RBP21.14■□□□□ 0.98
TSPAN4-206ENST00000397408 ADRA1AP35348 466 aa21.14■□□□□ 0.98
TSPAN4-206ENST00000397408 KCNJ1P48048 391 aa21.14■□□□□ 0.98
TSPAN4-206ENST00000397408 SPARCL1Q14515 664 aa21.14■□□□□ 0.98
TSPAN4-206ENST00000397408 PUM1Q14671 1186 aaKnown RBP eCLIP21.14■□□□□ 0.98
TSPAN4-206ENST00000397408 ZNF765Q7L2R6 523 aa21.14■□□□□ 0.98
TSPAN4-206ENST00000397408 NRSN1Q8IZ57 195 aa21.14■□□□□ 0.98
TSPAN4-206ENST00000397408 GLIS1Q8NBF1 620 aa21.14■□□□□ 0.98
TSPAN4-206ENST00000397408 ACTRT1Q8TDG2 376 aa21.14■□□□□ 0.98
TSPAN4-206ENST00000397408 BLOC1S5Q8TDH9 187 aa21.14■□□□□ 0.98
TSPAN4-206ENST00000397408 SCAMP4Q969E2 229 aa21.14■□□□□ 0.98
TSPAN4-206ENST00000397408 LRRC45Q96CN5 670 aa21.14■□□□□ 0.98
TSPAN4-206ENST00000397408 EID2BQ96D98 161 aa21.14■□□□□ 0.98
TSPAN4-206ENST00000397408 TBL1YQ9BQ87 522 aa21.14■□□□□ 0.98
TSPAN4-206ENST00000397408 CAAP1Q9H8G2 361 aa21.14■□□□□ 0.98
TSPAN4-206ENST00000397408 DRG1Q9Y295 367 aaKnown RBP21.14■□□□□ 0.98
TSPAN4-206ENST00000397408 DCHS1Q96JQ0 3298 aa21.14■□□□□ 0.97
TSPAN4-206ENST00000397408 DCDC2BA2VCK2 349 aa21.13■□□□□ 0.97
TSPAN4-206ENST00000397408 CACNB4O00305 520 aaPredicted RBP21.13■□□□□ 0.97
TSPAN4-206ENST00000397408 AURKAO14965 403 aa21.13■□□□□ 0.97
TSPAN4-206ENST00000397408 PCDHGA12O60330 932 aa21.13■□□□□ 0.97
TSPAN4-206ENST00000397408 SDC3O75056 442 aa21.13■□□□□ 0.97
TSPAN4-206ENST00000397408 USP12O75317 370 aa21.13■□□□□ 0.97
TSPAN4-206ENST00000397408 HTR1BP28222 390 aa21.13■□□□□ 0.97
TSPAN4-206ENST00000397408 SPINT3P49223 89 aa21.13■□□□□ 0.97
TSPAN4-206ENST00000397408 KIAA1024LP59773 190 aa21.13■□□□□ 0.97
TSPAN4-206ENST00000397408 DPTQ07507 201 aa21.13■□□□□ 0.97
TSPAN4-206ENST00000397408 KCTD11Q693B1 232 aa21.13■□□□□ 0.97
TSPAN4-206ENST00000397408 RANBP10Q6VN20 620 aa21.13■□□□□ 0.97
TSPAN4-206ENST00000397408 GSTA5Q7RTV2 222 aa21.13■□□□□ 0.97
TSPAN4-206ENST00000397408 TMC3Q7Z5M5 1100 aa21.13■□□□□ 0.97
TSPAN4-206ENST00000397408 HEATR4Q86WZ0 1026 aa21.13■□□□□ 0.97
TSPAN4-206ENST00000397408 GATAD2AQ86YP4 633 aa21.13■□□□□ 0.97
TSPAN4-206ENST00000397408 NAXDQ8IW45 347 aa21.13■□□□□ 0.97
TSPAN4-206ENST00000397408 RAVER1Q8IY67 606 aaKnown RBP21.13■□□□□ 0.97
TSPAN4-206ENST00000397408 FUBP1Q96AE4 644 aaKnown RBP21.13■□□□□ 0.97
TSPAN4-206ENST00000397408 HACD3Q9P035 362 aa21.13■□□□□ 0.97
TSPAN4-206ENST00000397408 CTAGE9A4FU28 777 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 ZSCAN5DPP0CG00 497 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 NME1P15531 152 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 TRIM23P36406 574 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 GPR1P46091 355 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 BNIP3Q12983 259 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 EIF2B5Q13144 721 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 SUZ12Q15022 739 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 PAPD7Q5XG87 772 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 GLT6D1Q7Z4J2 308 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 PDCD7Q8N8D1 485 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 SAP25Q8TEE9 199 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 SETD7Q8WTS6 366 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 MAGOHBQ96A72 148 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 RIOK2Q9BVS4 552 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 TRABDQ9H4I3 376 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 LRRC40Q9H9A6 602 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 PAK5Q9P286 719 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 TDRD6O60522 2096 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 RGSL1A5PLK6 1076 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 FANCGO15287 622 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 FLRT2O43155 660 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 SH3BP5O60239 455 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 AP2A1O95782 977 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 SOD1P00441 154 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 CSF2P04141 144 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 TEAD1P28347 426 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 FDFT1P37268 417 aa21.12■□□□□ 0.97
TSPAN4-206ENST00000397408 ENPP7Q6UWV6 458 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms