RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 SLC41A1Q8IVJ1 513 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 AADATQ8N5Z0 425 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 SLC43A3Q8NBI5 491 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 BPIFB6Q8NFQ5 453 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 OVCA2Q8WZ82 227 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 GAL3ST3Q96A11 431 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 NMD3Q96D46 503 aaKnown RBP7.19□□□□□ -1.26
UPF2-203ENST00000397053 SNRNP25Q9BV90 132 aaKnown RBP7.19□□□□□ -1.26
UPF2-203ENST00000397053 FAM83DQ9H4H8 585 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 RNF121Q9H920 327 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 SLC40A1Q9NP59 571 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 ETNK2Q9NVF9 386 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 SEC14L3Q9UDX4 400 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 HMGXB4Q9UGU5 601 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 DMTF1Q9Y222 760 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 NEMP2A6NFY4 417 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 ZNF879B4DU55 563 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 SNX4O95219 450 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 ALOX5P09917 674 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 ITPKAP23677 461 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 PKNOX1P55347 436 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 WNT3AP56704 352 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 RGS8P57771 180 aaPredicted RBP7.19□□□□□ -1.26
UPF2-203ENST00000397053 RFX4Q33E94 735 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 BRMS1LQ5PSV4 323 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 THAP5Q7Z6K1 395 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 CHST4Q8NCG5 386 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 OR4L1Q8NH43 312 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 SLC22A17Q8WUG5 538 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 HMGB4Q8WW32 186 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 KAT2AQ92830 837 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 CERS2Q96G23 380 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 SGK2Q9HBY8 427 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 EVLQ9UI08 416 aaPredicted RBP7.19□□□□□ -1.26
UPF2-203ENST00000397053 MYRFQ9Y2G1 1151 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 FRMPD4Q14CM0 1322 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 SCAMP1O15126 338 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 SIN3BO75182 1162 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 S100A9P06702 114 aaKnown RBP7.19□□□□□ -1.26
UPF2-203ENST00000397053 KLK3P07288 261 aaPredicted RBP7.19□□□□□ -1.26
UPF2-203ENST00000397053 GLRA2P23416 452 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 ALDH4A1P30038 563 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 CORO1AP31146 461 aaKnown RBP7.19□□□□□ -1.26
UPF2-203ENST00000397053 STARP49675 285 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 MAPK10P53779 464 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 CASP6P55212 293 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 CRADDP78560 199 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 PUDPQ08623 228 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 AAK1Q2M2I8 961 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 TXNDC11Q6PKC3 985 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 PLPPR4Q7Z2D5 763 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 PIWIL4Q7Z3Z4 852 aaKnown RBP7.19□□□□□ -1.26
UPF2-203ENST00000397053 ZNF433Q8N7K0 673 aaPredicted RBP7.19□□□□□ -1.26
UPF2-203ENST00000397053 OR2L5Q8NG80 312 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 COX4I2Q96KJ9 171 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 MFSD14AQ96MC6 490 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 NSMCE3Q96MG7 304 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 KLHL5Q96PQ7 755 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.19□□□□□ -1.26
UPF2-203ENST00000397053 ARHGEF40Q8TER5 1519 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 SIGLEC16A6NMB1 481 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 SUV39H1O43463 412 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 CA12O43570 354 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 SERPINA3P01011 423 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 RLN1P04808 185 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 CYP17A1P05093 508 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 ARL3P36405 182 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 CAP1Q01518 475 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 GAD2Q05329 585 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 RASGEF1BQ0VAM2 473 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 ATP1A4Q13733 1029 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 PHF19Q5T6S3 580 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 CPTPQ5TA50 214 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 ZCCHC12Q6PEW1 402 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 ATG14Q6ZNE5 492 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 FAM129CQ86XR2 697 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 TMEM156Q8N614 296 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 ZCCHC10Q8TBK6 192 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 BTN2A3PQ96KV6 586 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 PRICKLE1Q96MT3 831 aaPredicted RBP7.19□□□□□ -1.26
UPF2-203ENST00000397053 OR52E6Q96RD3 313 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 WRAP53Q9BUR4 548 aaKnown RBP7.19□□□□□ -1.26
UPF2-203ENST00000397053 TMPRSS4Q9NRS4 437 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 CRNNQ9UBG3 495 aaPredicted RBP7.19□□□□□ -1.26
UPF2-203ENST00000397053 RGS17Q9UGC6 210 aaPredicted RBP7.19□□□□□ -1.26
UPF2-203ENST00000397053 BTRCQ9Y297 605 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 DISP1Q96F81 1524 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 GLYATL1P3A0A0U1RQE8 302 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 WASHC1A8K0Z3 465 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 WASH3PC4AMC7 463 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 UGT2B17O75795 530 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 TSPAN8P19075 237 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 ACTR1BP42025 376 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 AVPR1BP47901 424 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 DGKGP49619 791 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 ZNF143P52747 638 aaPredicted RBP7.18□□□□□ -1.26
UPF2-203ENST00000397053 PRMT2P55345 433 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 PTENP60484 403 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 ACTR1AP61163 376 aa7.18□□□□□ -1.26
UPF2-203ENST00000397053 SLC13A2Q13183 592 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms