RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 ITGA9Q13797 1035 aa17.17■□□□□ 0.34
SCNN1A-205ENST00000396966 ARMC12Q5T9G4 340 aa17.17■□□□□ 0.34
SCNN1A-205ENST00000396966 SDCCAG8Q86SQ7 713 aaPredicted RBP17.17■□□□□ 0.34
SCNN1A-205ENST00000396966 MDGA1Q8NFP4 955 aa17.17■□□□□ 0.34
SCNN1A-205ENST00000396966 OR4L1Q8NH43 312 aa17.17■□□□□ 0.34
SCNN1A-205ENST00000396966 PPP4R1Q8TF05 950 aa17.17■□□□□ 0.34
SCNN1A-205ENST00000396966 SREK1Q8WXA9 508 aaKnown RBP17.17■□□□□ 0.34
SCNN1A-205ENST00000396966 CDKN2AIPNLQ96HQ2 116 aa17.17■□□□□ 0.34
SCNN1A-205ENST00000396966 ZSWIM3Q96MP5 696 aa17.17■□□□□ 0.34
SCNN1A-205ENST00000396966 NMRAL1Q9HBL8 299 aa17.17■□□□□ 0.34
SCNN1A-205ENST00000396966 CATSPERZQ9NTU4 200 aa17.17■□□□□ 0.34
SCNN1A-205ENST00000396966 CCDC162PA2VCL2 907 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 OR51F1A6NGY5 319 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 EIF4E1BA6NMX2 242 aaKnown RBP17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 SLC9A3R1O14745 358 aaPredicted RBP17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 SLC35E2BP0CK96 405 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 CPA3P15088 417 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 HLA-FP30511 346 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 GRIA4P48058 902 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 ERFP50548 548 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 BCL2L1Q07817 233 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 PTPRCAPQ14761 206 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 ARHGAP24Q8N264 748 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 STMN2Q93045 179 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 TSPAN17Q96FV3 270 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 LMLNQ96KR4 655 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 SORT1Q99523 831 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 LMAN2LQ9H0V9 348 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 SUDS3Q9H7L9 328 aaPredicted RBP17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 SLC25A13Q9UJS0 675 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 APOBEC2Q9Y235 224 aaKnown RBP17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 PCDHB9Q9Y5E1 797 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 A0A087X1B8 175 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 FZD6O60353 706 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 PSMG1O95456 288 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 OGNP20774 298 aaKnown RBP17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 TUBB3Q13509 450 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 VWA5B1Q5TIE3 1220 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 MAVSQ7Z434 540 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 EFHBQ8N7U6 833 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 OR4K2Q8NGD2 314 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 MYO19Q96H55 970 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 OMDQ99983 421 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 THTPAQ9BU02 230 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 STOML1Q9UBI4 398 aa17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 EVLQ9UI08 416 aaPredicted RBP17.16■□□□□ 0.34
SCNN1A-205ENST00000396966 AURKAO14965 403 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 S1PR4O95977 384 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 TYRP14679 529 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 GRK2P25098 689 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 ABL2P42684 1182 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 TAS2R39P59534 338 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 CBX2Q14781 532 aaPredicted RBP17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 DUSP6Q16828 381 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 ZNF789Q5FWF6 425 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 AFTPHQ6ULP2 937 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 CEP97Q8IW35 865 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 MFSD6LQ8IWD5 586 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 PAF1Q8N7H5 531 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 LINC00597Q9H2U6 94 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 MARCH4Q9P2E8 410 aaPredicted RBP17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 CORO1CQ9ULV4 474 aaPredicted RBP17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 RUVBL2Q9Y230 463 aaKnown RBP17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 MEI4A8MW99 385 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 TBX10O75333 385 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 PGLSO95336 258 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 SLC4A1P02730 911 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 SRCP12931 536 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 PBX2P40425 430 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 KPNA2P52292 529 aaKnown RBP17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 ABCE1P61221 599 aaKnown RBP17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 RPL26P61254 145 aaKnown RBP17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 SNRPD1P62314 119 aaKnown RBP17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 TSNAXIP1Q2TAA8 658 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 RBM20Q5T481 1227 aaKnown RBP17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 SCUBE1Q8IWY4 988 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 RYBPQ8N488 228 aaPredicted RBP17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 CELF5Q8N6W0 485 aaKnown RBP17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 OR2AP1Q8NGE2 309 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 ITFG1Q8TB96 612 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 RPL10LQ96L21 214 aaKnown RBP17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 SIKE1Q9BRV8 207 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 C1QTNF1Q9BXJ1 281 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 ATP13A3Q9H7F0 1226 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 PLA2G4CQ9UP65 541 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 HS3ST2Q9Y278 367 aa17.15■□□□□ 0.34
SCNN1A-205ENST00000396966 MAGEC1O60732 1142 aa17.14■□□□□ 0.33
SCNN1A-205ENST00000396966 SOCS5O75159 536 aa17.14■□□□□ 0.33
SCNN1A-205ENST00000396966 PABPC1P11940 636 aaKnown RBP17.14■□□□□ 0.33
SCNN1A-205ENST00000396966 PSMA3P25788 255 aa17.14■□□□□ 0.33
SCNN1A-205ENST00000396966 PMLP29590 882 aa17.14■□□□□ 0.33
SCNN1A-205ENST00000396966 NRIP1P48552 1158 aa17.14■□□□□ 0.33
SCNN1A-205ENST00000396966 IDH3AP50213 366 aa17.14■□□□□ 0.33
SCNN1A-205ENST00000396966 RAP1GDS1P52306 607 aa17.14■□□□□ 0.33
SCNN1A-205ENST00000396966 PGGT1BP53609 377 aa17.14■□□□□ 0.33
SCNN1A-205ENST00000396966 SULT2A1Q06520 285 aa17.14■□□□□ 0.33
SCNN1A-205ENST00000396966 DMC1Q14565 340 aa17.14■□□□□ 0.33
SCNN1A-205ENST00000396966 TBCCQ15814 346 aa17.14■□□□□ 0.33
SCNN1A-205ENST00000396966 FUT11Q495W5 492 aa17.14■□□□□ 0.33
SCNN1A-205ENST00000396966 LY6G5CQ5SRR4 150 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms