RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 YTHDF1Q9BYJ9 559 aaKnown RBP24.01■■□□□ 1.43
CSNK1E-203ENST00000396832 WDCPQ9H6R7 721 aa24.01■■□□□ 1.43
CSNK1E-203ENST00000396832 V9GYQ6 96 aa24.01■■□□□ 1.43
CSNK1E-203ENST00000396832 MT-ND1P03886 318 aa24.01■■□□□ 1.43
CSNK1E-203ENST00000396832 NFKBIAP25963 317 aa24.01■■□□□ 1.43
CSNK1E-203ENST00000396832 OPRL1P41146 370 aa24.01■■□□□ 1.43
CSNK1E-203ENST00000396832 CAPRIN1Q14444 709 aaKnown RBP24.01■■□□□ 1.43
CSNK1E-203ENST00000396832 FUNDC1Q8IVP5 155 aa24.01■■□□□ 1.43
CSNK1E-203ENST00000396832 C17orf50Q8WW18 174 aa24.01■■□□□ 1.43
CSNK1E-203ENST00000396832 TBL1YQ9BQ87 522 aa24.01■■□□□ 1.43
CSNK1E-203ENST00000396832 MROQ9BYG7 248 aa24.01■■□□□ 1.43
CSNK1E-203ENST00000396832 ST14Q9Y5Y6 855 aa24.01■■□□□ 1.43
CSNK1E-203ENST00000396832 SEC14L2O76054 403 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 MBL2P11226 248 aaPredicted RBP24■■□□□ 1.43
CSNK1E-203ENST00000396832 RPS9P46781 194 aaKnown RBP24■■□□□ 1.43
CSNK1E-203ENST00000396832 RPL34P49207 117 aaKnown RBP24■■□□□ 1.43
CSNK1E-203ENST00000396832 GEN1Q17RS7 908 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 PERM1Q5SV97 790 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 DEPDC1Q5TB30 811 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 NOTUMQ6P988 496 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 ZNF773Q6PK81 442 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 ADGRG5Q8IZF4 528 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 CADM3Q8N126 398 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 AFAP1L2Q8N4X5 818 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 SH3RF2Q8TEC5 729 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 RAB2BQ8WUD1 216 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 ROPN1LQ96C74 230 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 HDAC11Q96DB2 347 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 MYRFLQ96LU7 910 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 GPRC5DQ9NZD1 345 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 RBMX2Q9Y388 322 aaKnown RBP24■■□□□ 1.43
CSNK1E-203ENST00000396832 RAD54BQ9Y620 910 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 MEIS3P2A8K0S8 358 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 PABPC1P11940 636 aaKnown RBP24■■□□□ 1.43
CSNK1E-203ENST00000396832 TAPT1Q6NXT6 567 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 PKN3Q6P5Z2 889 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 RYBPQ8N488 228 aaPredicted RBP24■■□□□ 1.43
CSNK1E-203ENST00000396832 PNPT1Q8TCS8 783 aaKnown RBP24■■□□□ 1.43
CSNK1E-203ENST00000396832 ZNF347Q96SE7 839 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 COLEC11Q9BWP8 271 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 RAD21L1Q9H4I0 556 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 NUDT5Q9UKK9 219 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 DSEQ9UL01 958 aa24■■□□□ 1.43
CSNK1E-203ENST00000396832 ZSWIM8A7E2V4 1837 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 CCDC162PA2VCL2 907 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 NR5A2O00482 541 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 ATP5F1P24539 256 aaPredicted RBP23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 ELK4P28324 431 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 SCNN1AP37088 669 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 FAM83EQ2M2I3 478 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 KIF19Q2TAC6 998 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 FRA10AC1Q70Z53 315 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 TRPV3Q8NET8 790 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 ABHD11Q8NFV4 315 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 HPS1Q92902 700 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 MRPL57Q9BQC6 102 aaKnown RBP23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 FSD1LQ9BXM9 530 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 GPN2Q9H9Y4 310 aaPredicted RBP23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 NSMCE4AQ9NXX6 385 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 MAP10Q9P2G4 905 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 SLC27A5Q9Y2P5 690 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 TTC3P53804 2025 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 TTC24A2A3L6 582 aaPredicted RBP23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 A8MT66 165 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 FZD9O00144 591 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 PPP6CO00743 305 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 SLC25A27O95847 323 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 DNAJB13P59910 316 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 CCNA1P78396 465 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 SEMA3BQ13214 749 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 PSMD5Q16401 504 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 FAM35AQ86V20 835 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 IFNEQ86WN2 208 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 ZNF560Q96MR9 790 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 SLC2A13Q96QE2 648 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 KIFC1Q9BW19 673 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 LHPPQ9H008 270 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 NDFIP2Q9NV92 336 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 FBXW11Q9UKB1 542 aa23.99■■□□□ 1.43
CSNK1E-203ENST00000396832 MYBPHLA2RUH7 354 aa23.98■■□□□ 1.43
CSNK1E-203ENST00000396832 CPB1P15086 417 aa23.98■■□□□ 1.43
CSNK1E-203ENST00000396832 SH3YL1Q96HL8 342 aaPredicted RBP23.98■■□□□ 1.43
CSNK1E-203ENST00000396832 C3orf30Q96M34 536 aa23.98■■□□□ 1.43
CSNK1E-203ENST00000396832 CRTAC1Q9NQ79 661 aa23.98■■□□□ 1.43
CSNK1E-203ENST00000396832 SUPT7LO94864 414 aa23.98■■□□□ 1.43
CSNK1E-203ENST00000396832 CYP51A1Q16850 503 aa23.98■■□□□ 1.43
CSNK1E-203ENST00000396832 USP51Q70EK9 711 aa23.98■■□□□ 1.43
CSNK1E-203ENST00000396832 PIM3Q86V86 326 aa23.98■■□□□ 1.43
CSNK1E-203ENST00000396832 ANKRD49Q8WVL7 239 aa23.98■■□□□ 1.43
CSNK1E-203ENST00000396832 EML4Q9HC35 981 aaKnown RBP23.98■■□□□ 1.43
CSNK1E-203ENST00000396832 TMEM98Q9Y2Y6 226 aa23.98■■□□□ 1.43
CSNK1E-203ENST00000396832 UBFD1O14562 309 aaKnown RBP23.97■■□□□ 1.43
CSNK1E-203ENST00000396832 SYNCRIPO60506 623 aaKnown RBP23.97■■□□□ 1.43
CSNK1E-203ENST00000396832 SLC4A1P02730 911 aa23.97■■□□□ 1.43
CSNK1E-203ENST00000396832 JUNBP17275 347 aaPredicted RBP23.97■■□□□ 1.43
CSNK1E-203ENST00000396832 EEF1DP29692 281 aaKnown RBP23.97■■□□□ 1.43
CSNK1E-203ENST00000396832 AFF1P51825 1210 aaKnown RBP23.97■■□□□ 1.43
CSNK1E-203ENST00000396832 DAOAP59103 153 aa23.97■■□□□ 1.43
CSNK1E-203ENST00000396832 BTBD8Q5XKL5 378 aa23.97■■□□□ 1.43
CSNK1E-203ENST00000396832 LCN8Q6JVE9 175 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms