RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 C3orf70A6NLC5 250 aaPredicted RBP10.38□□□□□ -0.75
NEDD8-202ENST00000396828 CDRT15L2A8MXV6 281 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 RIOK3O14730 519 aaKnown RBP10.38□□□□□ -0.75
NEDD8-202ENST00000396828 EFSO43281 561 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 DAPK3O43293 454 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 IGSF6O95976 241 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 ARSEP51690 589 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 TMPRSS3P57727 454 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 RHOAP61586 193 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 YPEL5P62699 121 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 TUBB4BP68371 445 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 PPARDQ03181 441 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 CFHR1Q03591 330 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 DPYSL3Q14195 570 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 LY6DQ14210 128 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 PTK2BQ14289 1009 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 INPP5AQ14642 412 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 INO80DQ53TQ3 878 aaPredicted RBP10.38□□□□□ -0.75
NEDD8-202ENST00000396828 KAZNQ674X7 775 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 AADACL2Q6P093 401 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 MFSD7Q6UXD7 560 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 RBM44Q6ZP01 1051 aaKnown RBP10.38□□□□□ -0.75
NEDD8-202ENST00000396828 ZNF572Q7Z3I7 529 aaPredicted RBP10.38□□□□□ -0.75
NEDD8-202ENST00000396828 RD3Q7Z3Z2 195 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 RFX6Q8HWS3 928 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 CAMK1DQ8IU85 385 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 HID1Q8IV36 788 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 TP53INP2Q8IXH6 220 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 KYQ8NBH2 561 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 PLA2G15Q8NCC3 412 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 LSM14AQ8ND56 463 aaKnown RBP10.38□□□□□ -0.75
NEDD8-202ENST00000396828 BTN2A2Q8WVV5 523 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 CELF6Q96J87 481 aaKnown RBP10.38□□□□□ -0.75
NEDD8-202ENST00000396828 HEMGNQ9BXL5 484 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 CPEB1Q9BZB8 566 aaKnown RBP10.38□□□□□ -0.75
NEDD8-202ENST00000396828 SLC13A1Q9BZW2 595 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 SLC39A8Q9C0K1 460 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 LRRC19Q9H756 370 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 PCDH18Q9HCL0 1135 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 PCDH12Q9NPG4 1184 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 HOMER3Q9NSC5 361 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 DKK3Q9UBP4 350 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 GULP1Q9UBP9 304 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 PADI4Q9UM07 663 aa10.38□□□□□ -0.75
NEDD8-202ENST00000396828 hCG_1818297A0A087WSY0 165 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 A0A1W2PQM1 296 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 TSPAN11A1L157 253 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 TTC24A2A3L6 582 aaPredicted RBP10.37□□□□□ -0.75
NEDD8-202ENST00000396828 ZSCAN5CA6NGD5 496 aaPredicted RBP10.37□□□□□ -0.75
NEDD8-202ENST00000396828 WASH4PA8MWX3 477 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 CCDC188H7C350 402 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 PYCARD-AS1I3L0S3 204 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 ERVH48-1M5A8F1 160 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 AGRPO00253 132 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 PDE2AO00408 941 aaPredicted RBP10.37□□□□□ -0.75
NEDD8-202ENST00000396828 EEF2KO00418 725 aaKnown RBP10.37□□□□□ -0.75
NEDD8-202ENST00000396828 NTN3O00634 580 aaPredicted RBP10.37□□□□□ -0.75
NEDD8-202ENST00000396828 TNFSF15O95150 251 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 ANXA6P08133 673 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 CD48P09326 243 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 C6P13671 934 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 HGFP14210 728 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 ZFXP17010 805 aaPredicted RBP10.37□□□□□ -0.75
NEDD8-202ENST00000396828 GM2AP17900 193 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 HTR7P34969 479 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 HCAR3P49019 387 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 LIG3P49916 1009 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 HK3P52790 923 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 YBEYP58557 167 aaPredicted RBP10.37□□□□□ -0.75
NEDD8-202ENST00000396828 TPI1P60174 286 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 CCL7P80098 99 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 SRSF6Q13247 344 aaKnown RBP10.37□□□□□ -0.75
NEDD8-202ENST00000396828 LRRC14Q15048 493 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 TAZQ16635 292 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 UGP2Q16851 508 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 ANKRD20A8PQ5CZ79 823 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 KIAA1614Q5VZ46 1190 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 CCDC70Q6NSX1 233 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 IGF2-ASQ6U949 168 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 ENPP7Q6UWV6 458 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 ARHGAP36Q6ZRI8 547 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 ZNF605Q86T29 641 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 UMODL1-AS1Q8N2C9 162 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 PELI3Q8N2H9 469 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 TTC13Q8NBP0 860 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 TSEN2Q8NCE0 465 aaKnown RBP10.37□□□□□ -0.75
NEDD8-202ENST00000396828 SPATA4Q8NEY3 305 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 PCDH19Q8TAB3 1148 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 TTC9Q92623 222 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 CCDC74AQ96AQ1 378 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 KCTD15Q96SI1 283 aaPredicted RBP10.37□□□□□ -0.75
NEDD8-202ENST00000396828 APOOQ9BUR5 198 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 AP1M1Q9BXS5 423 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 FOXP3Q9BZS1 431 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 SUV39H2Q9H5I1 410 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 SYNDIG1Q9H7V2 258 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 MRPL40Q9NQ50 206 aaKnown RBP10.37□□□□□ -0.75
NEDD8-202ENST00000396828 THSD1Q9NS62 852 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 PCDHGA8Q9Y5G5 932 aa10.37□□□□□ -0.75
NEDD8-202ENST00000396828 MYO18BQ8IUG5 2567 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms