RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 CCL11P51671 97 aa13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 NRG1Q02297 640 aaPredicted RBP13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 ERAP2Q6P179 960 aa13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 CT55Q8WUE5 264 aa13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 CASKIN2Q8WXE0 1202 aa13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 RUFY1Q96T51 708 aa13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 BRD8Q9H0E9 1235 aa13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 ACTL8Q9H568 366 aa13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 NOL6Q9H6R4 1146 aaKnown RBP13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 LHX9Q9NQ69 397 aa13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 TMEM248Q9NWD8 314 aa13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 ARMCX3Q9UH62 379 aaPredicted RBP13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 USP25Q9UHP3 1055 aa13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 MOSPD1Q9UJG1 213 aa13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 SLC17A4Q9Y2C5 497 aa13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 PLEKHM1Q9Y4G2 1056 aa13.63□□□□□ -0.23
VCPKMT-201ENST00000395859 MAP1AP78559 2803 aaPredicted RBP13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 ZSCAN5CA6NGD5 496 aaPredicted RBP13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 ABCB7O75027 752 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 KIAA0754O94854 1291 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 EML2O95834 649 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 IVLP07476 585 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 XPAP23025 273 aaPredicted RBP13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 SULT1E1P49888 294 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 PMS1P54277 932 aaKnown RBP13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 BIRC2Q13490 618 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 IL10RAQ13651 578 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 SLC25A52Q3SY17 297 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 PLEKHN1Q494U1 663 aaPredicted RBP13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 PTPN20Q4JDL3 420 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 BRAT1Q6PJG6 821 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 SMYD4Q8IYR2 804 aaPredicted RBP13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 ADAMTS17Q8TE56 1095 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 SEC14L1Q92503 715 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 ECHDC3Q96DC8 303 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 STAMBPL1Q96FJ0 436 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 AHCYL2Q96HN2 611 aaKnown RBP13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 ZNF641Q96N77 438 aaPredicted RBP13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 GBP4Q96PP9 640 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 SLC38A3Q99624 504 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 NUDT9Q9BW91 350 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 KLC2Q9H0B6 622 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 TMEM51Q9NW97 253 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 PADI1Q9ULC6 663 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 PCDHGC3Q9UN70 934 aa13.62□□□□□ -0.23
VCPKMT-201ENST00000395859 ARGFXA6NJG6 315 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 P4HA2O15460 535 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 THAP12O43422 761 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 NDUFA10O95299 355 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 C9P02748 559 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 FGF5P12034 268 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 RHOQP17081 205 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 GNA15P30679 374 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 ACTR1BP42025 376 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 ME1P48163 572 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 POLD2P49005 469 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 ACTR1AP61163 376 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 DNM1Q05193 864 aaKnown RBP13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 DEUP1Q05D60 604 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 PEX6Q13608 980 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 IL11RAQ14626 422 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 CYTH1Q15438 398 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 TRNP1Q6NT89 227 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 RHOT1Q8IXI2 618 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 CBARPQ8N350 705 aaPredicted RBP13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 EHBP1Q8NDI1 1231 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 FDCSPQ8NFU4 85 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 NCSTNQ92542 709 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 COQ10AQ96MF6 247 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 SMAD5Q99717 465 aaKnown RBP13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 ANP32EQ9BTT0 268 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 AKIRIN1Q9H9L7 192 aaPredicted RBP13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 SARS2Q9NP81 518 aaKnown RBP13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 ACSS2Q9NR19 701 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 DNAI1Q9UI46 699 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 STAP1Q9ULZ2 295 aa13.61□□□□□ -0.23
VCPKMT-201ENST00000395859 BECN2A8MW95 431 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 TEX33O43247 280 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 PFKFB1P16118 471 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 LPOP22079 712 aaPredicted RBP13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 CASP14P31944 242 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 PTGER4P35408 488 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 EPHA4P54764 986 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 RNASE9P60153 205 aaKnown RBP13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 RHOAP61586 193 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 SH3BP2P78314 561 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 CDK3Q00526 305 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 FKBP3Q00688 224 aaKnown RBP13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 DPPA4Q7L190 304 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 GDF7Q7Z4P5 450 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 CAMK1DQ8IU85 385 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 IQCKQ8N0W5 287 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 CISD2Q8N5K1 135 aaKnown RBP13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 C1orf131Q8NDD1 294 aaKnown RBP13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 INPP5DQ92835 1189 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 EXOC2Q96KP1 924 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 GPR87Q9BY21 358 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 RUBCNLQ9H714 662 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 SUDS3Q9H7L9 328 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms