RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 TEX28O15482 410 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 H2AFYO75367 372 aaKnown RBP17.89■□□□□ 0.45
SREBF1-204ENST00000395756 RHOBTB1O94844 696 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 PRLP01236 227 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 CDH18Q13634 790 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 TBCCQ15814 346 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 PFKFB4Q16877 469 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 ZRANB3Q5FWF4 1079 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 TMEM150AQ86TG1 271 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 ISCA2Q86U28 154 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 KDM1BQ8NB78 822 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 TADA1Q96BN2 335 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 KLF16Q9BXK1 252 aaPredicted RBP17.89■□□□□ 0.45
SREBF1-204ENST00000395756 FKBPLQ9UIM3 349 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 PATJQ8NI35 1801 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 ZBBXA8MT70 800 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 PRAMEF12O95522 483 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 PIK3R1P27986 724 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 GABRR2P28476 465 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 ANKRD33Q7Z3H0 272 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 NRG4Q8WWG1 115 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 ESAMQ96AP7 390 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 SORCS3Q9UPU3 1222 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 PCDHGA4Q9Y5G9 962 aa17.89■□□□□ 0.45
SREBF1-204ENST00000395756 IQCF5A8MTL0 148 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 UBXN8O00124 270 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 SMIM24O75264 130 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 NDUFS3O75489 264 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 SRP72O76094 671 aaKnown RBP17.88■□□□□ 0.45
SREBF1-204ENST00000395756 ALPIP09923 528 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 MUM1Q2TAK8 710 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 PAQR3Q6TCH7 311 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 TAS2R42Q7RTR8 314 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 PIANPQ8IYJ0 282 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 HS6ST3Q8IZP7 471 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 SLC26A7Q8TE54 656 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 USP13Q92995 863 aaPredicted RBP17.88■□□□□ 0.45
SREBF1-204ENST00000395756 COMMD8Q9NX08 183 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 BLOC1S6Q9UL45 172 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 ILVBLA1L0T0 632 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 H3BMM5 538 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 MAGEC1O60732 1142 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 SMNDC1O75940 238 aaKnown RBP eCLIP17.88■□□□□ 0.453e-8■■■□□ 17.1
SREBF1-204ENST00000395756 CRTAMO95727 393 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 ITGAXP20702 1163 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 CSKP41240 450 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 EPHB3P54753 998 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 NME5P56597 212 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 RHOAP61586 193 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 DSG1Q02413 1049 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 TRAF2Q12933 501 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 CWF19L1Q69YN2 538 aaKnown RBP17.88■□□□□ 0.45
SREBF1-204ENST00000395756 CUZD1Q86UP6 607 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 SLC39A11Q8N1S5 342 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 PLD4Q96BZ4 506 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 RPL10LQ96L21 214 aaKnown RBP17.88■□□□□ 0.45
SREBF1-204ENST00000395756 UBXN10Q96LJ8 280 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 TRIB3Q96RU7 358 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 BEGAINQ9BUH8 593 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 TDRD1Q9BXT4 1180 aaKnown RBP17.88■□□□□ 0.45
SREBF1-204ENST00000395756 CCDC68Q9H2F9 335 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 TLR9Q9NR96 1032 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 CLEC4EQ9ULY5 219 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 PTGDR2Q9Y5Y4 395 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 C2orf81A6NN90 581 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 ENO3P13929 434 aaPredicted RBP17.88■□□□□ 0.45
SREBF1-204ENST00000395756 KPNA2P52292 529 aaKnown RBP17.88■□□□□ 0.45
SREBF1-204ENST00000395756 C1QTNF8P60827 252 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 NSUN2Q08J23 767 aaKnown RBP eCLIP17.88■□□□□ 0.45
SREBF1-204ENST00000395756 TBL3Q12788 808 aaKnown RBP17.88■□□□□ 0.45
SREBF1-204ENST00000395756 PSAPL1Q6NUJ1 521 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 CNKSR3Q6P9H4 555 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 CAMK1DQ8IU85 385 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 APCDD1Q8J025 514 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 TSC22D3Q99576 134 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 MRPL17Q9NRX2 175 aaKnown RBP17.88■□□□□ 0.45
SREBF1-204ENST00000395756 INSL5Q9Y5Q6 135 aa17.88■□□□□ 0.45
SREBF1-204ENST00000395756 NRG2O14511 850 aaPredicted RBP17.87■□□□□ 0.45
SREBF1-204ENST00000395756 CD160O95971 181 aa17.87■□□□□ 0.45
SREBF1-204ENST00000395756 RBP1P09455 135 aa17.87■□□□□ 0.45
SREBF1-204ENST00000395756 TCN1P20061 433 aaPredicted RBP17.87■□□□□ 0.45
SREBF1-204ENST00000395756 MNX1P50219 401 aaPredicted RBP17.87■□□□□ 0.45
SREBF1-204ENST00000395756 PRMT2P55345 433 aa17.87■□□□□ 0.45
SREBF1-204ENST00000395756 ACAP2Q15057 778 aa17.87■□□□□ 0.45
SREBF1-204ENST00000395756 PTPRNQ16849 979 aa17.87■□□□□ 0.45
SREBF1-204ENST00000395756 PIWIL4Q7Z3Z4 852 aaKnown RBP17.87■□□□□ 0.45
SREBF1-204ENST00000395756 FATE1Q969F0 183 aa17.87■□□□□ 0.45
SREBF1-204ENST00000395756 NSUN5Q96P11 429 aaKnown RBP17.87■□□□□ 0.45
SREBF1-204ENST00000395756 UTP6Q9NYH9 597 aaKnown RBP17.87■□□□□ 0.45
SREBF1-204ENST00000395756 GIMAP2Q9UG22 337 aa17.87■□□□□ 0.45
SREBF1-204ENST00000395756 ANKRD66B4E2M5 251 aa17.87■□□□□ 0.45
SREBF1-204ENST00000395756 STX16-NPEPL1H3BU86 382 aa17.87■□□□□ 0.45
SREBF1-204ENST00000395756 UBFD1O14562 309 aaKnown RBP17.87■□□□□ 0.45
SREBF1-204ENST00000395756 TPD52L2O43399 206 aaKnown RBP17.87■□□□□ 0.45
SREBF1-204ENST00000395756 SMAD6O43541 496 aaKnown RBP17.87■□□□□ 0.45
SREBF1-204ENST00000395756 GFAPP14136 432 aa17.87■□□□□ 0.45
SREBF1-204ENST00000395756 POLD2P49005 469 aa17.87■□□□□ 0.45
SREBF1-204ENST00000395756 PRKAA2P54646 552 aa17.87■□□□□ 0.45
SREBF1-204ENST00000395756 PKNOX1P55347 436 aa17.87■□□□□ 0.45
SREBF1-204ENST00000395756 TIAL1Q01085 375 aaKnown RBP eCLIP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms