RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 ARHGAP28Q9P2N2 729 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 MYH8P13535 1937 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 ARHGAP23Q9P227 1491 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 ZNF701M0R085 212 aaPredicted RBP17.01■□□□□ 0.31
SREBF1-203ENST00000395751 TEX28O15482 410 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 SNX4O95219 450 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 STAG3L1P0CL83 205 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 ITGA2P17301 1181 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 DSG3P32926 999 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 NFATC3Q12968 1075 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 STXBP5Q5T5C0 1151 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 GARNL3Q5VVW2 1013 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 FSTL4Q6MZW2 842 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 MEIOBQ8N635 442 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 FBXL20Q96IG2 436 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 COMMD9Q9P000 198 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 CASZ1Q86V15 1759 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 NFKB1P19838 968 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 ANXA11P50995 505 aaKnown RBP17.01■□□□□ 0.31
SREBF1-203ENST00000395751 POLR2JP52435 117 aaKnown RBP17.01■□□□□ 0.31
SREBF1-203ENST00000395751 SYTL3Q4VX76 610 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 SLC2A7Q6PXP3 512 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 PTCHD4Q6ZW05 846 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 TOR1AIP2Q8NFQ8 470 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 SNX27Q96L92 541 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 MFSD14AQ96MC6 490 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 GSDMCQ9BYG8 508 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 AASDHPPTQ9NRN7 309 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 CATSPERZQ9NTU4 200 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 PTGFRNQ9P2B2 879 aa17.01■□□□□ 0.31
SREBF1-203ENST00000395751 UBQLN1Q9UMX0 589 aaKnown RBP17.01■□□□□ 0.31
SREBF1-203ENST00000395751 CXCL8P10145 99 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 KRT33BQ14525 404 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 HIST2H2ACQ16777 129 aaPredicted RBP17■□□□□ 0.31
SREBF1-203ENST00000395751 HIST2H2AA3Q6FI13 130 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 GPRIN3Q6ZVF9 776 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 MMP27Q9H306 513 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 XPNPEP1Q9NQW7 623 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 MAP3K20Q9NYL2 800 aaKnown RBP17■□□□□ 0.31
SREBF1-203ENST00000395751 PRAMEF33A0A0G2JMD5 474 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 ELOVL7A1L3X0 281 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 PDPK1O15530 556 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 NPHS1O60500 1241 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 PRAMEF10O60809 474 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 CHRNGP07510 517 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 YBX3P16989 372 aaKnown RBP eCLIP17■□□□□ 0.314e-8■■□□□ 14.1
SREBF1-203ENST00000395751 CCNCP24863 283 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 MZF1P28698 734 aaPredicted RBP17■□□□□ 0.31
SREBF1-203ENST00000395751 MAB21L1Q13394 359 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 CHSY3Q70JA7 882 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 SPATA2LQ8IUW3 424 aaPredicted RBP17■□□□□ 0.31
SREBF1-203ENST00000395751 CLIP4Q8N3C7 705 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 LZTR1Q8N653 840 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 MRPL48Q96GC5 212 aaKnown RBP17■□□□□ 0.31
SREBF1-203ENST00000395751 CNOT11Q9UKZ1 510 aaKnown RBP17■□□□□ 0.31
SREBF1-203ENST00000395751 DISP2A7MBM2 1401 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 DHX15O43143 795 aaKnown RBP17■□□□□ 0.31
SREBF1-203ENST00000395751 SUPT20HL2P0C7V6 817 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 TBRG1Q3YBR2 411 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 SUPT20HL1Q3ZLR7 823 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 RHBDF2Q6PJF5 856 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 PLEKHG7Q6ZR37 379 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 GMCL1P1Q8NEA9 526 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 OR52K2Q8NGK3 314 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 STON2Q8WXE9 905 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 AP5M1Q9H0R1 490 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 CPNE5Q9HCH3 593 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 KRCC1Q9NPI7 259 aaPredicted RBP17■□□□□ 0.31
SREBF1-203ENST00000395751 GNB5O14775 395 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 DNAJB5O75953 348 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 POLD2P49005 469 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 EPGNQ6UW88 154 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 NKAPQ8N5F7 415 aaKnown RBP17■□□□□ 0.31
SREBF1-203ENST00000395751 PHF10Q8WUB8 498 aaKnown RBP17■□□□□ 0.31
SREBF1-203ENST00000395751 P2RY11Q96G91 374 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 TMEM138Q9NPI0 162 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 POLE4Q9NR33 117 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 AAASQ9NRG9 546 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 PAQR5Q9NXK6 330 aaPredicted RBP17■□□□□ 0.31
SREBF1-203ENST00000395751 SNTG2Q9NY99 539 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 RDH8Q9NYR8 311 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 NFKBIL1Q9UBC1 381 aaPredicted RBP17■□□□□ 0.31
SREBF1-203ENST00000395751 ZNRF3Q9ULT6 936 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 PIN4Q9Y237 131 aaKnown RBP17■□□□□ 0.31
SREBF1-203ENST00000395751 MFHAS1Q9Y4C4 1052 aa17■□□□□ 0.31
SREBF1-203ENST00000395751 FAM47E-STBD1D6RA91 191 aa16.99■□□□□ 0.31
SREBF1-203ENST00000395751 HNRNPFP52597 415 aaKnown RBP16.99■□□□□ 0.31
SREBF1-203ENST00000395751 ZNF135P52742 658 aaPredicted RBP16.99■□□□□ 0.31
SREBF1-203ENST00000395751 ZNF45Q02386 682 aa16.99■□□□□ 0.31
SREBF1-203ENST00000395751 ARHGEF6Q15052 776 aa16.99■□□□□ 0.31
SREBF1-203ENST00000395751 USP39Q53GS9 565 aaKnown RBP16.99■□□□□ 0.31
SREBF1-203ENST00000395751 HMBOX1Q6NT76 420 aa16.99■□□□□ 0.31
SREBF1-203ENST00000395751 TTC29Q8NA56 475 aaPredicted RBP16.99■□□□□ 0.31
SREBF1-203ENST00000395751 ERMAPQ96PL5 475 aaPredicted RBP16.99■□□□□ 0.31
SREBF1-203ENST00000395751 KLQ9UEF7 1012 aa16.99■□□□□ 0.31
SREBF1-203ENST00000395751 FAM50BQ9Y247 325 aa16.99■□□□□ 0.31
SREBF1-203ENST00000395751 ZNF510Q9Y2H8 683 aa16.99■□□□□ 0.31
SREBF1-203ENST00000395751 STON1Q9Y6Q2 735 aa16.99■□□□□ 0.31
SREBF1-203ENST00000395751 NOBOXO60393 691 aa16.99■□□□□ 0.31
SREBF1-203ENST00000395751 RNASEH2AO75792 299 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms