RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 PTPN9P43378 593 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 CPT1AP50416 773 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 MRPS15P82914 257 aaKnown RBP13.23□□□□□ -0.29
NFKB1-202ENST00000394820 PRKCQQ04759 706 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 PWP1Q13610 501 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 ZYG11AQ6WRX3 759 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 PIWIL4Q7Z3Z4 852 aaKnown RBP13.23□□□□□ -0.29
NFKB1-202ENST00000394820 LINC00523Q86TU6 105 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 LINC01465Q8N7H1 131 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.23□□□□□ -0.29
NFKB1-202ENST00000394820 SPATA17Q96L03 361 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 CRTAC1Q9NQ79 661 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 COQ6Q9Y2Z9 468 aa13.23□□□□□ -0.29
NFKB1-202ENST00000394820 A0A0U1RQS6 177 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 CCDC154A6NI56 674 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 A8MU76 341 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 PIRO00625 290 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 SLC2A4P14672 509 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 NPY2RP49146 381 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 MAP2K5Q13163 448 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 DNASE1L3Q13609 305 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 ATG14Q6ZNE5 492 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 ZDHHC17Q8IUH5 632 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 CCDC103Q8IW40 242 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 SYTL1Q8IYJ3 562 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 SMG8Q8ND04 991 aaKnown RBP13.22□□□□□ -0.29
NFKB1-202ENST00000394820 CAPSLQ8WWF8 208 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 APBB2Q92870 758 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 NSUN5Q96P11 429 aaKnown RBP13.22□□□□□ -0.29
NFKB1-202ENST00000394820 OSBPL6Q9BZF3 934 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 ARID1BQ8NFD5 2236 aaPredicted RBP13.22□□□□□ -0.29
NFKB1-202ENST00000394820 MKI67P46013 3256 aaKnown RBP13.22□□□□□ -0.29
NFKB1-202ENST00000394820 COL1A2P08123 1366 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 SYNDIG1LA6NDD5 238 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 RGS5O15539 181 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 HTRA2O43464 458 aaPredicted RBP13.22□□□□□ -0.29
NFKB1-202ENST00000394820 SNAP29O95721 258 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 LTA4HP09960 611 aaKnown RBP13.22□□□□□ -0.29
NFKB1-202ENST00000394820 IRF1P10914 325 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 CDH3P22223 829 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 KCNA5P22460 613 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 DPP6P42658 865 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 DIO3P55073 304 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 GRB14Q14449 540 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 PKDCCQ504Y2 493 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 PCID2Q5JVF3 399 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 SPRYD7Q5W111 196 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 ZC3HC1Q86WB0 502 aaKnown RBP13.22□□□□□ -0.29
NFKB1-202ENST00000394820 FBXO39Q8N4B4 442 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 GIPC2Q8TF65 315 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 COLEC11Q9BWP8 271 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 NDEL1Q9GZM8 345 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 ZBTB26Q9HCK0 441 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 PALMDQ9NP74 551 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 VPS4AQ9UN37 437 aa13.22□□□□□ -0.29
NFKB1-202ENST00000394820 PTGESO14684 152 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 IPO13O94829 963 aaKnown RBP13.21□□□□□ -0.29
NFKB1-202ENST00000394820 ADRM1Q16186 407 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 FAM110CQ1W6H9 321 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 ZNF423Q2M1K9 1284 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 CCDC92Q53HC0 331 aaPredicted RBP13.21□□□□□ -0.29
NFKB1-202ENST00000394820 KIAA0319Q5VV43 1072 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 GCNT7Q6ZNI0 430 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 ABI1Q8IZP0 508 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 OR2T34Q8NGX1 318 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 OR2T3Q8NH03 318 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 METTL6Q8TCB7 284 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 TMEM209Q96SK2 561 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 UNC93B1Q9H1C4 597 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 FAM105AQ9NUU6 356 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 ANAPC2Q9UJX6 822 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 DOCK3Q8IZD9 2030 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 HACD1B0YJ81 288 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 G3V2L1 256 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 H3BNX3 289 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 DPYSL4O14531 572 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 ENPP3O14638 875 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 F2P00734 622 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 CCNA2P20248 432 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 C1QTNF8P60827 252 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 MYO9BQ13459 2157 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 RGS21Q2M5E4 152 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 METTL21CQ5VZV1 264 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 ZC3H7AQ8IWR0 971 aaKnown RBP13.21□□□□□ -0.29
NFKB1-202ENST00000394820 CRYBG2Q8N1P7 616 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 CFAP52Q8N1V2 620 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 NPWQ8N729 165 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 ITFG1Q8TB96 612 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 MYLPFQ96A32 169 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 ABHD8Q96I13 439 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 ZBTB18Q99592 522 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 GPATCH1Q9BRR8 931 aaKnown RBP13.21□□□□□ -0.29
NFKB1-202ENST00000394820 STN1Q9H668 368 aaKnown RBP13.21□□□□□ -0.29
NFKB1-202ENST00000394820 RMI1Q9H9A7 625 aa13.21□□□□□ -0.29
NFKB1-202ENST00000394820 TMEM114B3SHH9 223 aa13.21□□□□□ -0.3
NFKB1-202ENST00000394820 RBP1P09455 135 aa13.21□□□□□ -0.3
NFKB1-202ENST00000394820 SEMG2Q02383 582 aa13.21□□□□□ -0.3
NFKB1-202ENST00000394820 DSC2Q02487 901 aa13.21□□□□□ -0.3
NFKB1-202ENST00000394820 INSCQ1MX18 579 aa13.21□□□□□ -0.3
NFKB1-202ENST00000394820 AP5B1Q2VPB7 878 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms