RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 PDCD6IPQ8WUM4 868 aaKnown RBP6.97□□□□□ -1.29
RTN4-205ENST00000394609 DNAJC9Q8WXX5 260 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 RPL10LQ96L21 214 aaKnown RBP6.97□□□□□ -1.29
RTN4-205ENST00000394609 LRRC3BQ96PB8 259 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 BBS2Q9BXC9 721 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 TM6SF2Q9BZW4 377 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 SLC28A3Q9HAS3 691 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 ABCB8Q9NUT2 735 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 KIAA1522Q9P206 1035 aaPredicted RBP6.97□□□□□ -1.29
RTN4-205ENST00000394609 SLC17A7Q9P2U7 560 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 DPP7Q9UHL4 492 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 MSRAQ9UJ68 235 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 INTS6Q9UL03 887 aaKnown RBP6.97□□□□□ -1.29
RTN4-205ENST00000394609 GRID1Q9ULK0 1009 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 SMG5Q9UPR3 1016 aaKnown RBP6.97□□□□□ -1.29
RTN4-205ENST00000394609 KCTD3Q9Y597 815 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 UNC80Q8N2C7 3258 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 ANAPC1Q9H1A4 1944 aa6.97□□□□□ -1.29
RTN4-205ENST00000394609 A0A0U1RQS6 177 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 HEATR9A2RTY3 570 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 WDR91A4D1P6 747 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 ZNF197O14709 1029 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 TRIM24O15164 1050 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 ZWINTO95229 277 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 ALDOAP04075 364 aaKnown RBP6.96□□□□□ -1.29
RTN4-205ENST00000394609 ITGA2BP08514 1039 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 PDHA1P08559 390 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 CR2P20023 1033 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 SP100P23497 879 aaPredicted RBP6.96□□□□□ -1.29
RTN4-205ENST00000394609 DDX6P26196 483 aaKnown RBP eCLIP6.96□□□□□ -1.294e-30■□□□□ 10.7
RTN4-205ENST00000394609 MSX1P28360 303 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 HLA-FP30511 346 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 GP5P40197 560 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 VIPR2P41587 438 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 ARCN1P48444 511 aaKnown RBP6.96□□□□□ -1.29
RTN4-205ENST00000394609 SERPINB9P50453 376 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 RHOAP61586 193 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 TMPRSS15P98073 1019 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 PDE1BQ01064 536 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 CTBP1Q13363 440 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 LAMB3Q13751 1172 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 SEPT7Q16181 437 aaKnown RBP6.96□□□□□ -1.29
RTN4-205ENST00000394609 DUSP6Q16828 381 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 C4orf17Q53FE4 359 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 LY6G5CQ5SRR4 150 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 RARS2Q5T160 578 aaKnown RBP6.96□□□□□ -1.29
RTN4-205ENST00000394609 ALG1LQ6GMV1 187 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 FIGNL1Q6PIW4 674 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 LVRNQ6Q4G3 990 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 SLCO4C1Q6ZQN7 724 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 DENND6AQ8IWF6 608 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 ADGRG2Q8IZP9 1017 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 NAT16Q8N8M0 369 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 DCAF4L2Q8NA75 395 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 ACVR1CQ8NER5 493 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 FAM81AQ8TBF8 368 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 MYLIPQ8WY64 445 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 RMDN1Q96DB5 314 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 FEM1CQ96JP0 617 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 LRRC37BQ96QE4 947 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 CPNE1Q99829 537 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 C2orf49Q9BVC5 232 aaPredicted RBP6.96□□□□□ -1.29
RTN4-205ENST00000394609 TNKS2Q9H2K2 1166 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 VCX3BQ9H321 246 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 VCX3AQ9NNX9 186 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 TREX1Q9NSU2 369 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 PCMTD2Q9NV79 361 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 LHX3Q9UBR4 397 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 RAI2Q9Y5P3 530 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 ARL5AQ9Y689 179 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 XIRP2A4UGR9 3374 aa6.96□□□□□ -1.29
RTN4-205ENST00000394609 MAGEA13PA6NCF6 341 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 SHISA8B8ZZ34 492 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 COPEO14579 308 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 TPP1O14773 563 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 AURKAO14965 403 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 NVLO15381 856 aaKnown RBP6.96□□□□□ -1.3
RTN4-205ENST00000394609 LINC01565O15544 149 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 BNIP3LO60238 219 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 ASMTLO95671 621 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 NDST3O95803 873 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 PRLP01236 227 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 EPOP01588 193 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 SLC4A1P02730 911 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 THBS1P07996 1170 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 TYRP14679 529 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 SAT1P21673 171 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 WEE1P30291 646 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 GKP32189 559 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 FOXN2P32314 431 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 STK19P49842 368 aaPredicted RBP6.96□□□□□ -1.3
RTN4-205ENST00000394609 ARSDP51689 593 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 PGGT1BP53609 377 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 SLC18A2Q05940 514 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 NAB1Q13506 487 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 THOC5Q13769 683 aaKnown RBP6.96□□□□□ -1.3
RTN4-205ENST00000394609 FRG1Q14331 258 aaKnown RBP6.96□□□□□ -1.3
RTN4-205ENST00000394609 ZNF77Q15935 545 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 PLEKHG6Q3KR16 790 aa6.96□□□□□ -1.3
RTN4-205ENST00000394609 INO80DQ53TQ3 878 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms