RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 HCSTQ9UBK5 93 aa16.64■□□□□ 0.26
PRDM5-202ENST00000394435 TBC1D30Q9Y2I9 924 aa16.64■□□□□ 0.26
PRDM5-202ENST00000394435 AP4B1Q9Y6B7 739 aa16.64■□□□□ 0.26
PRDM5-202ENST00000394435 AK5Q9Y6K8 562 aa16.64■□□□□ 0.26
PRDM5-202ENST00000394435 PRORSD1PA6NEY8 169 aa16.64■□□□□ 0.25
PRDM5-202ENST00000394435 NRP2O60462 931 aa16.64■□□□□ 0.25
PRDM5-202ENST00000394435 TLR5O60602 858 aa16.64■□□□□ 0.25
PRDM5-202ENST00000394435 CDK14O94921 469 aa16.64■□□□□ 0.25
PRDM5-202ENST00000394435 ZNF37AP17032 561 aaPredicted RBP16.64■□□□□ 0.25
PRDM5-202ENST00000394435 NSUN5Q96P11 429 aaKnown RBP16.64■□□□□ 0.25
PRDM5-202ENST00000394435 MID1IP1Q9NPA3 183 aa16.64■□□□□ 0.25
PRDM5-202ENST00000394435 MRGBPQ9NV56 204 aa16.64■□□□□ 0.25
PRDM5-202ENST00000394435 RAB26Q9ULW5 256 aa16.64■□□□□ 0.25
PRDM5-202ENST00000394435 DNAJC15Q9Y5T4 150 aa16.64■□□□□ 0.25
PRDM5-202ENST00000394435 GREB1Q4ZG55 1949 aa16.64■□□□□ 0.25
PRDM5-202ENST00000394435 UBA6A0AVT1 1052 aaPredicted RBP16.63■□□□□ 0.25
PRDM5-202ENST00000394435 OR6C75A6NL08 312 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 F5H5T6 163 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 SRP72O76094 671 aaKnown RBP16.63■□□□□ 0.25
PRDM5-202ENST00000394435 SERPINF2P08697 491 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 SLC6A4P31645 630 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 FOXA1P55317 472 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 GK3PQ14409 553 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 C6orf52Q5T4I8 152 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 FUNDC1Q8IVP5 155 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 GALNT15Q8N3T1 639 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 CNBD2Q96M20 576 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 NSMCE3Q96MG7 304 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 SLC39A3Q9BRY0 314 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 AARSD1Q9BTE6 412 aaKnown RBP16.63■□□□□ 0.25
PRDM5-202ENST00000394435 SPATA16Q9BXB7 569 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 Q9H521 79 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 SPAG4Q9NPE6 437 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 CROTQ9UKG9 612 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 CHRM1P11229 460 aaPredicted RBP16.63■□□□□ 0.25
PRDM5-202ENST00000394435 MTHFD2P13995 350 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 CDKL1Q00532 357 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 RING1Q06587 406 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 DUSP4Q13115 394 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 LAMB3Q13751 1172 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 GEN1Q17RS7 908 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 KIF19Q2TAC6 998 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 RAB44Q7Z6P3 723 aaPredicted RBP16.63■□□□□ 0.25
PRDM5-202ENST00000394435 PIP4K2CQ8TBX8 421 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 CDKN2AIPNLQ96HQ2 116 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 KCNA7Q96RP8 456 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 SPON2Q9BUD6 331 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.63■□□□□ 0.25
PRDM5-202ENST00000394435 MRPL40Q9NQ50 206 aaKnown RBP16.63■□□□□ 0.25
PRDM5-202ENST00000394435 GMPR2Q9P2T1 348 aaKnown RBP16.63■□□□□ 0.25
PRDM5-202ENST00000394435 AP4S1Q9Y587 144 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 SPO11Q9Y5K1 396 aa16.63■□□□□ 0.25
PRDM5-202ENST00000394435 AP1G1O43747 822 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 EPOP01588 193 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 C8BP07358 591 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 GPX3P22352 226 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 HOXD9P28356 352 aaPredicted RBP16.62■□□□□ 0.25
PRDM5-202ENST00000394435 RGRP47804 291 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 SUOXP51687 545 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 STC1P52823 247 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 STX1BP61266 288 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 PITRM1Q5JRX3 1037 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 CYP2R1Q6VVX0 501 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 TRPC4APQ8TEL6 797 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 EXOC2Q96KP1 924 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 SMIM14Q96QK8 99 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 TRIB3Q96RU7 358 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 SEMA6AQ9H2E6 1030 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 CD300AQ9UGN4 299 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 NT5C1B-RDH14C9J2C7 533 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 PIP5K1BO14986 540 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 RHOBTB1O94844 696 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 PGM3O95394 542 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 NDST3O95803 873 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 CAPNS1P04632 268 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 SMIM18P0DKX4 95 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 GFAPP14136 432 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 OGNP20774 298 aaKnown RBP16.62■□□□□ 0.25
PRDM5-202ENST00000394435 FMO4P31512 558 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 GPR17Q13304 367 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 GRB7Q14451 532 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 FBXO48Q5FWF7 155 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 RNF180Q86T96 592 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 SATL1Q86VE3 508 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 ABI1Q8IZP0 508 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 TWIST2Q8WVJ9 160 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 PEX13Q92968 403 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 ATOH8Q96SQ7 321 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 TRIM4Q9C037 500 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 MARCH5Q9NX47 278 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 IKZF3Q9UKT9 509 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 FAM50BQ9Y247 325 aa16.62■□□□□ 0.25
PRDM5-202ENST00000394435 ZFP37Q9Y6Q3 630 aaPredicted RBP16.62■□□□□ 0.25
PRDM5-202ENST00000394435 AZIN1O14977 448 aa16.61■□□□□ 0.25
PRDM5-202ENST00000394435 CSPG5O95196 566 aa16.61■□□□□ 0.25
PRDM5-202ENST00000394435 FGFR3P22607 806 aa16.61■□□□□ 0.25
PRDM5-202ENST00000394435 GSTT1P30711 240 aa16.61■□□□□ 0.25
PRDM5-202ENST00000394435 ATP4BP51164 291 aa16.61■□□□□ 0.25
PRDM5-202ENST00000394435 GNA12Q03113 381 aa16.61■□□□□ 0.25
PRDM5-202ENST00000394435 CWF19L1Q69YN2 538 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms