RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 GALNT7Q86SF2 657 aa15.06■□□□□ 0
GPC3-202ENST00000394299 SDCCAG8Q86SQ7 713 aaPredicted RBP15.06■□□□□ 0
GPC3-202ENST00000394299 TMC8Q8IU68 726 aa15.06■□□□□ 0
GPC3-202ENST00000394299 SCG3Q8WXD2 468 aaKnown RBP15.06■□□□□ 0
GPC3-202ENST00000394299 CCDC97Q96F63 343 aaPredicted RBP15.06■□□□□ 0
GPC3-202ENST00000394299 RPL10LQ96L21 214 aaKnown RBP15.06■□□□□ 0
GPC3-202ENST00000394299 CATSPER2Q96P56 530 aa15.06■□□□□ 0
GPC3-202ENST00000394299 DDX50Q9BQ39 737 aaKnown RBP15.06■□□□□ 0
GPC3-202ENST00000394299 CORO1BQ9BR76 489 aa15.06■□□□□ 0
GPC3-202ENST00000394299 POLR3BQ9NW08 1133 aaPredicted RBP15.06■□□□□ 0
GPC3-202ENST00000394299 SORCS3Q9UPU3 1222 aa15.06■□□□□ 0
GPC3-202ENST00000394299 CCL26Q9Y258 94 aa15.06■□□□□ 0
GPC3-202ENST00000394299 GOLGA8CPA6NN73 597 aa15.05■□□□□ 0
GPC3-202ENST00000394299 C2orf81A6NN90 581 aa15.05■□□□□ 0
GPC3-202ENST00000394299 HIDE1A8MVS5 230 aa15.05■□□□□ 0
GPC3-202ENST00000394299 UBFD1O14562 309 aaKnown RBP15.05■□□□□ 0
GPC3-202ENST00000394299 WFS1O76024 890 aa15.05■□□□□ 0
GPC3-202ENST00000394299 SIX3O95343 332 aaPredicted RBP15.05■□□□□ 0
GPC3-202ENST00000394299 C8AP07357 584 aa15.05■□□□□ 0
GPC3-202ENST00000394299 CTSAP10619 480 aa15.05■□□□□ 0
GPC3-202ENST00000394299 PABPC1LQ4VXU2 614 aaKnown RBP15.05■□□□□ 0
GPC3-202ENST00000394299 KLC3Q6P597 504 aa15.05■□□□□ 0
GPC3-202ENST00000394299 ITIH5Q86UX2 942 aa15.05■□□□□ 0
GPC3-202ENST00000394299 SCUBE1Q8IWY4 988 aa15.05■□□□□ 0
GPC3-202ENST00000394299 HJURPQ8NCD3 748 aaPredicted RBP15.05■□□□□ 0
GPC3-202ENST00000394299 DTX3LQ8TDB6 740 aa15.05■□□□□ 0
GPC3-202ENST00000394299 AARSD1Q9BTE6 412 aaKnown RBP15.05■□□□□ 0
GPC3-202ENST00000394299 SLC46A2Q9BY10 475 aa15.05■□□□□ 0
GPC3-202ENST00000394299 RETREG1Q9H6L5 497 aa15.05■□□□□ 0
GPC3-202ENST00000394299 EVLQ9UI08 416 aaPredicted RBP15.05■□□□□ 0
GPC3-202ENST00000394299 PACSIN3Q9UKS6 424 aa15.05■□□□□ 0
GPC3-202ENST00000394299 LRG1P02750 347 aa15.05■□□□□ -0
GPC3-202ENST00000394299 ATP5BP06576 529 aaKnown RBP15.05■□□□□ -0
GPC3-202ENST00000394299 RBP1P09455 135 aa15.05■□□□□ -0
GPC3-202ENST00000394299 MC4RP32245 332 aa15.05■□□□□ -0
GPC3-202ENST00000394299 CD70P32970 193 aa15.05■□□□□ -0
GPC3-202ENST00000394299 CA5AP35218 305 aa15.05■□□□□ -0
GPC3-202ENST00000394299 SULT2A1Q06520 285 aa15.05■□□□□ -0
GPC3-202ENST00000394299 NSUN2Q08J23 767 aaKnown RBP eCLIP15.05■□□□□ -0
GPC3-202ENST00000394299 NAA25Q14CX7 972 aa15.05■□□□□ -0
GPC3-202ENST00000394299 TBCCQ15814 346 aa15.05■□□□□ -0
GPC3-202ENST00000394299 PREPLQ4J6C6 727 aaPredicted RBP15.05■□□□□ -0
GPC3-202ENST00000394299 WLSQ5T9L3 541 aa15.05■□□□□ -0
GPC3-202ENST00000394299 LILRA6Q6PI73 481 aa15.05■□□□□ -0
GPC3-202ENST00000394299 ULK2Q8IYT8 1036 aa15.05■□□□□ -0
GPC3-202ENST00000394299 RIN3Q8TB24 985 aa15.05■□□□□ -0
GPC3-202ENST00000394299 MRPS31Q92665 395 aaKnown RBP15.05■□□□□ -0
GPC3-202ENST00000394299 TNKS2Q9H2K2 1166 aa15.05■□□□□ -0
GPC3-202ENST00000394299 WBP1LQ9NX94 342 aa15.05■□□□□ -0
GPC3-202ENST00000394299 SLC7A8Q9UHI5 535 aa15.05■□□□□ -0
GPC3-202ENST00000394299 ARIH1Q9Y4X5 557 aaPredicted RBP15.05■□□□□ -0
GPC3-202ENST00000394299 A0A088AWK7 358 aa15.04■□□□□ -0
GPC3-202ENST00000394299 LCHNA4D1U4 455 aa15.04■□□□□ -0
GPC3-202ENST00000394299 UBXN8O00124 270 aa15.04■□□□□ -0
GPC3-202ENST00000394299 NPHS1O60500 1241 aa15.04■□□□□ -0
GPC3-202ENST00000394299 RHOBTB1O94844 696 aa15.04■□□□□ -0
GPC3-202ENST00000394299 SUPT7LO94864 414 aa15.04■□□□□ -0
GPC3-202ENST00000394299 RPSAP08865 295 aaKnown RBP15.04■□□□□ -0
GPC3-202ENST00000394299 COX4I1P13073 169 aa15.04■□□□□ -0
GPC3-202ENST00000394299 ZNF37AP17032 561 aaPredicted RBP15.04■□□□□ -0
GPC3-202ENST00000394299 LPOP22079 712 aaPredicted RBP15.04■□□□□ -0
GPC3-202ENST00000394299 CTSOP43234 321 aaPredicted RBP15.04■□□□□ -0
GPC3-202ENST00000394299 COPAP53621 1224 aa15.04■□□□□ -0
GPC3-202ENST00000394299 SESN3P58005 492 aa15.04■□□□□ -0
GPC3-202ENST00000394299 DNAJB13P59910 316 aa15.04■□□□□ -0
GPC3-202ENST00000394299 PDAP1Q13442 181 aaKnown RBP15.04■□□□□ -0
GPC3-202ENST00000394299 PTPRNQ16849 979 aa15.04■□□□□ -0
GPC3-202ENST00000394299 TYSND1Q2T9J0 566 aa15.04■□□□□ -0
GPC3-202ENST00000394299 ZRANB3Q5FWF4 1079 aa15.04■□□□□ -0
GPC3-202ENST00000394299 ARMC3Q5W041 872 aa15.04■□□□□ -0
GPC3-202ENST00000394299 CLEC6AQ6EIG7 209 aa15.04■□□□□ -0
GPC3-202ENST00000394299 LMNTD2Q8IXW0 634 aa15.04■□□□□ -0
GPC3-202ENST00000394299 LPGAT1Q92604 370 aa15.04■□□□□ -0
GPC3-202ENST00000394299 PEX13Q92968 403 aa15.04■□□□□ -0
GPC3-202ENST00000394299 TCEAL4Q96EI5 215 aa15.04■□□□□ -0
GPC3-202ENST00000394299 SSX2IPQ9Y2D8 614 aa15.04■□□□□ -0
GPC3-202ENST00000394299 ANKRD36A6QL64 1941 aa15.04■□□□□ -0
GPC3-202ENST00000394299 LTBP2Q14767 1821 aa15.04■□□□□ -0
GPC3-202ENST00000394299 CCDC189A1A4V9 331 aa15.04■□□□□ -0
GPC3-202ENST00000394299 IQCF5A8MTL0 148 aa15.04■□□□□ -0
GPC3-202ENST00000394299 NDUFS3O75489 264 aa15.04■□□□□ -0
GPC3-202ENST00000394299 RFPL2O75678 378 aa15.04■□□□□ -0
GPC3-202ENST00000394299 TM7SF2O76062 418 aa15.04■□□□□ -0
GPC3-202ENST00000394299 SRP72O76094 671 aaKnown RBP15.04■□□□□ -0
GPC3-202ENST00000394299 KPNA2P52292 529 aaKnown RBP15.04■□□□□ -0
GPC3-202ENST00000394299 EPHB1P54762 984 aa15.04■□□□□ -0
GPC3-202ENST00000394299 LMAN2Q12907 356 aa15.04■□□□□ -0
GPC3-202ENST00000394299 CUL3Q13618 768 aa15.04■□□□□ -0
GPC3-202ENST00000394299 PIWIL4Q7Z3Z4 852 aaKnown RBP15.04■□□□□ -0
GPC3-202ENST00000394299 TTC30BQ8N4P2 665 aa15.04■□□□□ -0
GPC3-202ENST00000394299 TMEM199Q8N511 208 aa15.04■□□□□ -0
GPC3-202ENST00000394299 FIBCD1Q8N539 461 aa15.04■□□□□ -0
GPC3-202ENST00000394299 KREMEN2Q8NCW0 462 aa15.04■□□□□ -0
GPC3-202ENST00000394299 MYLIPQ8WY64 445 aa15.04■□□□□ -0
GPC3-202ENST00000394299 CNDP1Q96KN2 507 aa15.04■□□□□ -0
GPC3-202ENST00000394299 BIRC8Q96P09 236 aa15.04■□□□□ -0
GPC3-202ENST00000394299 PANX3Q96QZ0 392 aa15.04■□□□□ -0
GPC3-202ENST00000394299 GPR21Q99679 349 aa15.04■□□□□ -0
GPC3-202ENST00000394299 ADGRE3Q9BY15 652 aa15.04■□□□□ -0
GPC3-202ENST00000394299 GSTO2Q9H4Y5 243 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms