RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 MLNP12872 115 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 MAGP20916 626 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 GLDCP23378 1020 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 SPRP35270 261 aaPredicted RBP9.97□□□□□ -0.81
PSEN1-204ENST00000394164 POLR2IP36954 125 aaKnown RBP9.97□□□□□ -0.81
PSEN1-204ENST00000394164 TAF2Q6P1X5 1199 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 BHLHA9Q7RTU4 235 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 LIMS2Q7Z4I7 341 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 CIR1Q86X95 450 aaPredicted RBP9.97□□□□□ -0.81
PSEN1-204ENST00000394164 METTL23Q86XA0 190 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 ZNF280BQ86YH2 543 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 ATPAF2Q8N5M1 289 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 PCYOX1LQ8NBM8 494 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 CANT1Q8WVQ1 401 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 TRIB2Q92519 343 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 ITPKCQ96DU7 683 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 PABPC5Q96DU9 382 aaKnown RBP9.97□□□□□ -0.81
PSEN1-204ENST00000394164 FCRL2Q96LA5 508 aaPredicted RBP9.97□□□□□ -0.81
PSEN1-204ENST00000394164 RBBP8Q99708 897 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 ANKRD60Q9BZ19 345 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.97□□□□□ -0.81
PSEN1-204ENST00000394164 WARS2Q9UGM6 360 aaKnown RBP9.97□□□□□ -0.81
PSEN1-204ENST00000394164 CDH7Q9ULB5 785 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 ATP11BQ9Y2G3 1177 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 TRIM38O00635 465 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 GJB3O75712 270 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 PIGNO95427 931 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 PCSK1P29120 753 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 PBX3P40426 434 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 HARS2P49590 506 aaKnown RBP9.97□□□□□ -0.81
PSEN1-204ENST00000394164 NEK2P51955 445 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 ARPC4P59998 168 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 CLCQ05315 142 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 TNK2Q07912 1038 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 CLPPQ16740 277 aaPredicted RBP9.97□□□□□ -0.81
PSEN1-204ENST00000394164 KIAA2013Q8IYS2 634 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 TTC9BQ8N6N2 239 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 RP9Q8TA86 221 aaKnown RBP9.97□□□□□ -0.81
PSEN1-204ENST00000394164 SREK1Q8WXA9 508 aaKnown RBP9.97□□□□□ -0.81
PSEN1-204ENST00000394164 SGCDQ92629 289 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 TFAP2CQ92754 450 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 CENPOQ9BU64 300 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 ADI1Q9BV57 179 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 OSBPL10Q9BXB5 764 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 TRIM8Q9BZR9 551 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 SLC39A8Q9C0K1 460 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 FAM124BQ9H5Z6 455 aaPredicted RBP9.97□□□□□ -0.81
PSEN1-204ENST00000394164 NMUR1Q9HB89 426 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 PALMDQ9NP74 551 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 MKS1Q9NXB0 559 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 PCDH10Q9P2E7 1040 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 RCOR3Q9P2K3 495 aaPredicted RBP9.97□□□□□ -0.81
PSEN1-204ENST00000394164 CDH9Q9ULB4 789 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 PCDHB12Q9Y5F1 795 aa9.97□□□□□ -0.81
PSEN1-204ENST00000394164 NEMP2A6NFY4 417 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 ZBBXA8MT70 800 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 CLOCKO15516 846 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 MAN1A2O60476 641 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 GUCY1B2O75343 617 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 ODC1P11926 461 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 SCNN1AP37088 669 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 HPCAL1P37235 193 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 PLK1P53350 603 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 NAGLUP54802 743 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 PIGFQ07326 219 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 SPANXN3Q5MJ09 141 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 SEL1L3Q68CR1 1132 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 SPATA2LQ8IUW3 424 aaPredicted RBP9.96□□□□□ -0.81
PSEN1-204ENST00000394164 PDZD8Q8NEN9 1154 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 TRPC4APQ8TEL6 797 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 CNDP1Q96KN2 507 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 TEKT5Q96M29 485 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 CPNE1Q99829 537 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 HGH1Q9BTY7 390 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 GATA5Q9BWX5 397 aaPredicted RBP9.96□□□□□ -0.81
PSEN1-204ENST00000394164 FSD1LQ9BXM9 530 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 MRPL46Q9H2W6 279 aaKnown RBP9.96□□□□□ -0.81
PSEN1-204ENST00000394164 CYP4F12Q9HCS2 524 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 RBM22Q9NW64 420 aaKnown RBP eCLIP9.96□□□□□ -0.81
PSEN1-204ENST00000394164 EGFL7Q9UHF1 273 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 TLK1Q9UKI8 766 aa9.96□□□□□ -0.81
PSEN1-204ENST00000394164 RUVBL2Q9Y230 463 aaKnown RBP9.96□□□□□ -0.81
PSEN1-204ENST00000394164 MTF2Q9Y483 593 aaPredicted RBP9.96□□□□□ -0.81
PSEN1-204ENST00000394164 A0A1W2PQH9 124 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 ANKRD34BA5PLL1 514 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 PRORSD1PA6NEY8 169 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 ZNF487B1APH4 448 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 SLC4A1P02730 911 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 DCKP27707 260 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 ALDH4A1P30038 563 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 CCND3P30281 292 aaPredicted RBP9.96□□□□□ -0.82
PSEN1-204ENST00000394164 OR1G1P47890 313 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 TUFMP49411 452 aaKnown RBP9.96□□□□□ -0.82
PSEN1-204ENST00000394164 FLT3LGP49771 235 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 NME5P56597 212 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 LSM3P62310 102 aaKnown RBP9.96□□□□□ -0.82
PSEN1-204ENST00000394164 SEMA3BQ13214 749 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 TRIM25Q14258 630 aaKnown RBP9.96□□□□□ -0.82
PSEN1-204ENST00000394164 KCNA10Q16322 511 aa9.96□□□□□ -0.82
PSEN1-204ENST00000394164 INAVAQ3KP66 663 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms