RNA–Protein interactions for RNA: ENST00000393559.1

LAMB1-202, Transcript of laminin subunit beta 1, humanhuman

TSL 2

Gene LAMB1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-202ENST00000393559 ZSWIM9Q86XI8 627 aa13.78□□□□□ -0.2
LAMB1-202ENST00000393559 CHPFQ8IZ52 775 aa13.78□□□□□ -0.2
LAMB1-202ENST00000393559 IQCKQ8N0W5 287 aa13.78□□□□□ -0.2
LAMB1-202ENST00000393559 STK40Q8N2I9 435 aa13.78□□□□□ -0.2
LAMB1-202ENST00000393559 OR2W6PQ8NHA6 318 aa13.78□□□□□ -0.2
LAMB1-202ENST00000393559 BLOC1S5Q8TDH9 187 aa13.78□□□□□ -0.2
LAMB1-202ENST00000393559 PIH1D2Q8WWB5 315 aa13.78□□□□□ -0.2
LAMB1-202ENST00000393559 OR8D1Q8WZ84 308 aa13.78□□□□□ -0.2
LAMB1-202ENST00000393559 ZNF669Q96BR6 464 aaPredicted RBP13.78□□□□□ -0.2
LAMB1-202ENST00000393559 ZBTB9Q96C00 473 aa13.78□□□□□ -0.2
LAMB1-202ENST00000393559 ZNF641Q96N77 438 aaPredicted RBP13.78□□□□□ -0.2
LAMB1-202ENST00000393559 KLHL32Q96NJ5 620 aa13.78□□□□□ -0.2
LAMB1-202ENST00000393559 ZIM3Q96PE6 472 aa13.78□□□□□ -0.2
LAMB1-202ENST00000393559 SMIM14Q96QK8 99 aa13.78□□□□□ -0.2
LAMB1-202ENST00000393559 RANBP9Q96S59 729 aa13.78□□□□□ -0.2
LAMB1-202ENST00000393559 VIPAS39Q9H9C1 493 aa13.78□□□□□ -0.2
LAMB1-202ENST00000393559 MRM3Q9HC36 420 aaKnown RBP13.78□□□□□ -0.2
LAMB1-202ENST00000393559 SUN2Q9UH99 717 aa13.78□□□□□ -0.2
LAMB1-202ENST00000393559 RPL26L1Q9UNX3 145 aaKnown RBP13.78□□□□□ -0.2
LAMB1-202ENST00000393559 SPO11Q9Y5K1 396 aa13.78□□□□□ -0.2
LAMB1-202ENST00000393559 STON1Q9Y6Q2 735 aa13.78□□□□□ -0.2
LAMB1-202ENST00000393559 RPS6KL1Q9Y6S9 549 aa13.78□□□□□ -0.2
LAMB1-202ENST00000393559 FAM237BA0A1B0GVD1 139 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 MAGEB16A2A368 324 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 CCDC78A2IDD5 438 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 HEATR9A2RTY3 570 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 ANKRD66B4E2M5 251 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 NPC1O15118 1278 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 ATP8B1O43520 1251 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 SPAG6O75602 509 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 LEFTY1O75610 366 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 SHBGP04278 402 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 POLBP06746 335 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 CTSLP07711 333 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 CTPS1P17812 591 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 SLC8A1P32418 973 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 GRIA4P48058 902 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 EML5Q05BV3 1969 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 IFFO1Q0D2I5 559 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 CRYMQ14894 314 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 SPANXN3Q5MJ09 141 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 C9orf64Q5T6V5 341 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 LRIG3Q6UXM1 1119 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 HDDC3Q8N4P3 179 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 GSDMBQ8TAX9 411 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 FBF1Q8TES7 1133 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 PTCD2Q8WV60 388 aaKnown RBP13.77□□□□□ -0.21
LAMB1-202ENST00000393559 ZCCHC14Q8WYQ9 949 aaKnown RBP13.77□□□□□ -0.21
LAMB1-202ENST00000393559 ECHDC3Q96DC8 303 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 LRIG1Q96JA1 1093 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 RUFY1Q96T51 708 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 KIFC1Q9BW19 673 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 TMEM121BQ9BXQ6 578 aaPredicted RBP13.77□□□□□ -0.21
LAMB1-202ENST00000393559 OSBPL1AQ9BXW6 950 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 CHRAC1Q9NRG0 131 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.77□□□□□ -0.21
LAMB1-202ENST00000393559 PILRBQ9UKJ0 227 aa13.77□□□□□ -0.21
LAMB1-202ENST00000393559 DSPP15924 2871 aaKnown RBP13.77□□□□□ -0.21
LAMB1-202ENST00000393559 ANKRD36A6QL64 1941 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 ANKRD11Q6UB99 2663 aaPredicted RBP13.76□□□□□ -0.21
LAMB1-202ENST00000393559 A0A0J9YYE9 177 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 A0A1W2PQ67 120 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 TCRBV9S1A1TA0A576 114 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 TMEM8BA6NDV4 472 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 SRRM3A6NNA2 597 aaPredicted RBP13.76□□□□□ -0.21
LAMB1-202ENST00000393559 USP1O94782 785 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 TRBC1P01850 177 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 CHRM1P11229 460 aaPredicted RBP13.76□□□□□ -0.21
LAMB1-202ENST00000393559 NMBRP28336 390 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 STX2P32856 288 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 ABL2P42684 1182 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 ENPP2Q13822 863 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 COL9A2Q14055 689 aaPredicted RBP13.76□□□□□ -0.21
LAMB1-202ENST00000393559 ELAVL3Q14576 367 aaKnown RBP13.76□□□□□ -0.21
LAMB1-202ENST00000393559 PTPRRQ15256 657 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 ANKRD20A4Q4UJ75 823 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 ARMC3Q5W041 872 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 SLC23A3Q6PIS1 610 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 TRMT11Q7Z4G4 463 aaKnown RBP13.76□□□□□ -0.21
LAMB1-202ENST00000393559 GLT6D1Q7Z4J2 308 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 TMEM135Q86UB9 458 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.76□□□□□ -0.21
LAMB1-202ENST00000393559 GATA6Q92908 595 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 MFSD3Q96ES6 412 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 ZNF778Q96MU6 729 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 FCRL3Q96P31 734 aaPredicted RBP13.76□□□□□ -0.21
LAMB1-202ENST00000393559 ACBD3Q9H3P7 528 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 PRSS16Q9NQE7 514 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 PHTF1Q9UMS5 762 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 SLC6A14Q9UN76 642 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 NFS1Q9Y697 457 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 MYLKQ15746 1914 aa13.76□□□□□ -0.21
LAMB1-202ENST00000393559 ZCWPW2A0A1B0GU75 182 aa13.75□□□□□ -0.21
LAMB1-202ENST00000393559 TSPAN11A1L157 253 aa13.75□□□□□ -0.21
LAMB1-202ENST00000393559 KPNA3O00505 521 aaPredicted RBP13.75□□□□□ -0.21
LAMB1-202ENST00000393559 LDB2O43679 373 aa13.75□□□□□ -0.21
LAMB1-202ENST00000393559 PRNPP04156 253 aa13.75□□□□□ -0.21
LAMB1-202ENST00000393559 ALPIP09923 528 aa13.75□□□□□ -0.21
LAMB1-202ENST00000393559 HOXB3P14651 431 aaPredicted RBP13.75□□□□□ -0.21
LAMB1-202ENST00000393559 HOXB2P14652 356 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms