RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 RAET1GQ6H3X3 334 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 ESRP1Q6NXG1 681 aaKnown RBP7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 PNCKQ6P2M8 343 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 DARS2Q6PI48 645 aaKnown RBP7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 DOK6Q6PKX4 331 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 KDELC1Q6UW63 502 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 DHRS13Q6UX07 377 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 BZW1Q7L1Q6 419 aaKnown RBP7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 PID1Q7Z2X4 250 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 LYSMD3Q7Z3D4 306 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 TECPR1Q7Z6L1 1165 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 GLRX5Q86SX6 157 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 HEATR4Q86WZ0 1026 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 DCP2Q8IU60 420 aaKnown RBP7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 SFTPA2Q8IWL1 248 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 CBARPQ8N350 705 aaPredicted RBP7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 TXLNBQ8N3L3 684 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 TAB3Q8N5C8 712 aaPredicted RBP7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 SLC25A41Q8N5S1 370 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 RNF10Q8N5U6 811 aaKnown RBP7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 UBL4BQ8N7F7 174 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 IPMKQ8NFU5 416 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 FAM174AQ8TBP5 190 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 CCDC110Q8TBZ0 833 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 ATG4AQ8WYN0 398 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 OR1E3Q8WZA6 343 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 TADA1Q96BN2 335 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 EID2BQ96D98 161 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 IFT43Q96FT9 208 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 HES6Q96HZ4 224 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 WDR92Q96MX6 357 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 CDC6Q99741 560 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 MLPHQ9BV36 600 aaPredicted RBP7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 RIOK2Q9BVS4 552 aaKnown RBP7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 SCNM1Q9BWG6 230 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 TSGA10Q9BZW7 698 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 ABCG8Q9H221 673 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 KCNF1Q9H3M0 494 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 WDR26Q9H7D7 661 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 ARFGAP3Q9NP61 516 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 HAUS2Q9NVX0 235 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 KLQ9UEF7 1012 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 RSPH14Q9UHP6 348 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 MOSPD1Q9UJG1 213 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 PPP2R2CQ9Y2T4 447 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 PPIL1Q9Y3C6 166 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 ANKRD36A6QL64 1941 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 LY6G6EA0A0G2JKS1 128 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 MIF4GDA9UHW6 222 aaKnown RBP7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 HACD1B0YJ81 288 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 ANKRD66B4E2M5 251 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 H3BM21 787 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 PSMD11O00231 422 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 CACNB4O00305 520 aaPredicted RBP7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 SPTBN2O15020 2390 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 INPP4BO15327 924 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 AQP9O43315 295 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 TJP3O95049 919 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 RASGRP1O95267 797 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 FUCA1P04066 466 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 NFKBIAP25963 317 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 PSMB4P28070 264 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 HTR1BP28222 390 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 GPR1P46091 355 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 HK3P52790 923 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 GDF10P55107 478 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 WNT3AP56704 352 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 KIAA1024LP59773 190 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 SRP54P61011 504 aaKnown RBP7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 CDK3Q00526 305 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 PPARDQ03181 441 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 CDK18Q07002 472 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 AKAP13Q12802 2813 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 BPTFQ12830 3046 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 KLF1Q13351 362 aaPredicted RBP7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 XRCC4Q13426 336 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 PROX2Q3B8N5 592 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 SIRPB2Q5JXA9 342 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 ANKRD20A2Q5SQ80 823 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 ZNF648Q5T619 568 aaPredicted RBP7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 MEI1Q5TIA1 1274 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 ANKRD20A1Q5TYW2 823 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 ANKRD20A3Q5VUR7 823 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 MICALCLQ6ZW33 695 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 MARK2Q7KZI7 788 aaKnown RBP7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 RAB44Q7Z6P3 723 aaPredicted RBP7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 PRUNE1Q86TP1 453 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 CDKL3Q8IVW4 592 aaPredicted RBP7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 NDUFAF2Q8N183 169 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 FAM71DQ8N9W8 422 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 OR4C6Q8NH72 309 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 CCL4L1Q8NHW4 92 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 AP2M1Q96CW1 435 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 MRGPRX2Q96LB1 330 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 APOLD1Q96LR9 279 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 CNTNAP3BQ96NU0 1288 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 WDR24Q96S15 920 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 APOL2Q9BQE5 337 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 FICDQ9BVA6 458 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 ADGRE3Q9BY15 652 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms