RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 CSNK1DP48730 415 aa13.58□□□□□ -0.23
PTN-202ENST00000393083 BMPR2Q13873 1038 aa13.58□□□□□ -0.23
PTN-202ENST00000393083 ELAVL3Q14576 367 aaKnown RBP13.58□□□□□ -0.23
PTN-202ENST00000393083 HSP90AA5PQ58FG0 334 aa13.58□□□□□ -0.23
PTN-202ENST00000393083 LGSNQ5TDP6 509 aa13.58□□□□□ -0.23
PTN-202ENST00000393083 KIAA0930Q6ICG6 404 aaPredicted RBP13.58□□□□□ -0.23
PTN-202ENST00000393083 C4orf33Q8N1A6 199 aa13.58□□□□□ -0.23
PTN-202ENST00000393083 RYBPQ8N488 228 aaPredicted RBP13.58□□□□□ -0.23
PTN-202ENST00000393083 FRMD1Q8N878 549 aa13.58□□□□□ -0.23
PTN-202ENST00000393083 RLN3Q8WXF3 142 aa13.58□□□□□ -0.23
PTN-202ENST00000393083 SIPA1Q96FS4 1042 aa13.58□□□□□ -0.23
PTN-202ENST00000393083 CPNE1Q99829 537 aa13.58□□□□□ -0.23
PTN-202ENST00000393083 CAPS2Q9BXY5 557 aa13.58□□□□□ -0.23
PTN-202ENST00000393083 ADGRE3Q9BY15 652 aa13.58□□□□□ -0.23
PTN-202ENST00000393083 KCNK9Q9NPC2 374 aa13.58□□□□□ -0.23
PTN-202ENST00000393083 CD93Q9NPY3 652 aa13.58□□□□□ -0.23
PTN-202ENST00000393083 IARS2Q9NSE4 1012 aaKnown RBP13.58□□□□□ -0.23
PTN-202ENST00000393083 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.58□□□□□ -0.23
PTN-202ENST00000393083 USP36Q9P275 1121 aaKnown RBP13.58□□□□□ -0.23
PTN-202ENST00000393083 PSAT1Q9Y617 370 aa13.58□□□□□ -0.23
PTN-202ENST00000393083 EML5Q05BV3 1969 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.58□□□□□ -0.24
PTN-202ENST00000393083 RPP40O75818 363 aaKnown RBP13.58□□□□□ -0.24
PTN-202ENST00000393083 PRLP01236 227 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 IGLV3-19P01714 112 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 MT-ND3P03897 115 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 PDHA1P08559 390 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 SNRPAP09012 282 aaKnown RBP13.58□□□□□ -0.24
PTN-202ENST00000393083 PIRTP0C851 137 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 CHN1P15882 459 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 CNTFP26441 200 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 GP5P40197 560 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 SNRPD1P62314 119 aaKnown RBP13.58□□□□□ -0.24
PTN-202ENST00000393083 GNGT1P63211 74 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 LAMB3Q13751 1172 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 USP39Q53GS9 565 aaKnown RBP13.58□□□□□ -0.24
PTN-202ENST00000393083 TEDDM1Q5T9Z0 273 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 ZNF776Q68DI1 518 aaPredicted RBP13.58□□□□□ -0.24
PTN-202ENST00000393083 TTC19Q6DKK2 380 aaPredicted RBP13.58□□□□□ -0.24
PTN-202ENST00000393083 KIAA1324Q6UXG2 1013 aaKnown RBP13.58□□□□□ -0.24
PTN-202ENST00000393083 NLRP9Q7RTR0 991 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 PLPP6Q8IY26 295 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 PCDH20Q8N6Y1 951 aaKnown RBP13.58□□□□□ -0.24
PTN-202ENST00000393083 OR2AP1Q8NGE2 309 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 MDM1Q8TC05 714 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 VOPP1Q96AW1 172 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 MTBPQ96DY7 904 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 PHOX2BQ99453 314 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 AGAP2Q99490 1192 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 ITM2CQ9NQX7 267 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 NSMCE4AQ9NXX6 385 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 MBD1Q9UIS9 605 aaPredicted RBP13.58□□□□□ -0.24
PTN-202ENST00000393083 PPM1HQ9ULR3 514 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 INVSQ9Y283 1065 aa13.58□□□□□ -0.24
PTN-202ENST00000393083 MROH6A6NGR9 719 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 PROB1E7EW31 1015 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 GOLGA8TH3BQL2 631 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 LDB2O43679 373 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 ZNF217O75362 1048 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 SPAG7O75391 227 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 VAPBO95292 243 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 PIGNO95427 931 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 GSRP00390 522 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 ARNTP27540 789 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 MDH1P40925 334 aaKnown RBP13.57□□□□□ -0.24
PTN-202ENST00000393083 TPMTP51580 245 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 GUCY1A3Q02108 690 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 ZBTB16Q05516 673 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 BCL2L1Q07817 233 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 THOC5Q13769 683 aaKnown RBP13.57□□□□□ -0.24
PTN-202ENST00000393083 CST6Q15828 149 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 CNGA3Q16281 694 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 ARMC12Q5T9G4 340 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 DPY19L3Q6ZPD9 716 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 GLT6D1Q7Z4J2 308 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 STRA8Q7Z7C7 330 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 CACUL1Q86Y37 369 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 MMAAQ8IVH4 418 aaKnown RBP13.57□□□□□ -0.24
PTN-202ENST00000393083 FAM160A2Q8N612 972 aaPredicted RBP13.57□□□□□ -0.24
PTN-202ENST00000393083 ANKRD42Q8N9B4 389 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 CHST14Q8NCH0 376 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 BRSK1Q8TDC3 778 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 OR8D1Q8WZ84 308 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 KLF6Q99612 283 aaPredicted RBP13.57□□□□□ -0.24
PTN-202ENST00000393083 SARDHQ9UL12 918 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 SPO11Q9Y5K1 396 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 ARL5AQ9Y689 179 aa13.57□□□□□ -0.24
PTN-202ENST00000393083 IGHV1OR15-9A0A0B4J2B8 117 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 GOLGA8RI6L899 631 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 BNIP3LO60238 219 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 RNASEH1O60930 286 aaKnown RBP13.56□□□□□ -0.24
PTN-202ENST00000393083 SOCS5O75159 536 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 PGLSO95336 258 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 CRTAMO95727 393 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 CTSLP07711 333 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 KRT4P19013 534 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 BCKDHBP21953 392 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 GKP32189 559 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 GRIA4P48058 902 aa13.56□□□□□ -0.24
PTN-202ENST00000393083 ARCN1P48444 511 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms