RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 LDHDQ86WU2 507 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 AGBL3Q8NEM8 1001 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 RNASE11Q8TAA1 199 aaKnown RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 DCAKDQ8WVC6 231 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 OTULINQ96BN8 352 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 REXO5Q96IC2 774 aaKnown RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 FRMD6Q96NE9 622 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 REEP2Q9BRK0 252 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 BTBD2Q9BX70 525 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 PDGFDQ9GZP0 370 aaPredicted RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 SOX17Q9H6I2 414 aaPredicted RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 CDH9Q9ULB4 789 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 U3KQV3 271 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 PLOD2O00469 737 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 NR5A2O00482 541 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 SOCS2O14508 198 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 EGFRP00533 1210 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 CLEC2LP0C7M8 214 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 HLA-DPA1P20036 260 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 ALAS2P22557 587 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 TIE1P35590 1138 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 DEFA5Q01523 94 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 Q3C1V9 767 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 USP41Q3LFD5 358 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 ZNF425Q6IV72 752 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 ERMP1Q7Z2K6 904 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 CPNE8Q86YQ8 564 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 SCUBE3Q8IX30 993 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 FBXL6Q8N531 539 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 DNAAF3Q8N9W5 541 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 OR6Q1Q8NGQ2 317 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 OR10T2Q8NGX3 314 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 LHFPL5Q8TAF8 219 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 SLC7A14Q8TBB6 771 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 TCEAL3Q969E4 200 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 NSMCE2Q96MF7 247 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 SLC22A4Q9H015 551 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 RIBC2Q9H4K1 309 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 PIF1Q9H611 641 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 LIN7BQ9HAP6 207 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 CYP3A43Q9HB55 503 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 CYP4F12Q9HCS2 524 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 MYOZ2Q9NPC6 264 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 C14orf119Q9NWQ9 140 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 PAK5Q9P286 719 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 RAB23Q9ULC3 237 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 SPDYE2BA6NHP3 402 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 KCNU1A8MYU2 1149 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 TOR1AO14656 332 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 RECQL5O94762 991 aaPredicted RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 AMHP03971 560 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 SPDYE6P0CI01 402 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 CYP11B1P15538 503 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 ITGA2P17301 1181 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 TALDO1P37837 337 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 TRIP4Q15650 581 aaPredicted RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 HES5Q5TA89 166 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 SPOCD1Q6ZMY3 1216 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 GK5Q6ZS86 529 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 KRT74Q7RTS7 529 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 CELF2-AS1Q8N7Q2 184 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 C4orf32Q8N8J7 132 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 C3orf58Q8NDZ4 430 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 OR13J1Q8NGT2 312 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 MCOLN3Q8TDD5 553 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 SLC16A10Q8TF71 515 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 TNFRSF25Q93038 417 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 SGK3Q96BR1 496 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 TRNT1Q96Q11 434 aaKnown RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 SPATA9Q9BWV2 254 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 WDR11Q9BZH6 1224 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 DEFB129Q9H1M3 183 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 PPIL3Q9H2H8 161 aaKnown RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 MOCS1Q9NZB8 636 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 PRKAG2Q9UGJ0 569 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 CYTH4Q9UIA0 394 aa7.63□□□□□ -1.19
VTI1A-201ENST00000393077 DRG1Q9Y295 367 aaKnown RBP7.63□□□□□ -1.19
VTI1A-201ENST00000393077 ALS2Q96Q42 1657 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 PHRF1Q9P1Y6 1649 aaKnown RBP7.62□□□□□ -1.19
VTI1A-201ENST00000393077 PRSS51A0A1B0GVH4 220 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 EML1O00423 815 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 TRDMT1O14717 391 aaKnown RBP7.62□□□□□ -1.19
VTI1A-201ENST00000393077 MT-CO1P00395 513 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 SNRPB2P08579 225 aaKnown RBP7.62□□□□□ -1.19
VTI1A-201ENST00000393077 CD36P16671 472 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 IL7RP16871 459 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 CYP2A7P20853 494 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 MYL9P24844 172 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 SPRP35270 261 aaPredicted RBP7.62□□□□□ -1.19
VTI1A-201ENST00000393077 HADHBP55084 474 aaKnown RBP7.62□□□□□ -1.19
VTI1A-201ENST00000393077 S100A12P80511 92 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 POU5F1BQ06416 359 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 GRSF1Q12849 480 aaKnown RBP eCLIP7.62□□□□□ -1.19
VTI1A-201ENST00000393077 TARDBPQ13148 414 aaKnown RBP eCLIP7.62□□□□□ -1.191e-7■■■□□ 15
VTI1A-201ENST00000393077 RNASEH2BQ5TBB1 312 aaKnown RBP7.62□□□□□ -1.19
VTI1A-201ENST00000393077 GRTP1Q5TC63 336 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 NDUFAF5Q5TEU4 345 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 PRMT9Q6P2P2 845 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 OR13F1Q8NGS4 319 aa7.62□□□□□ -1.19
VTI1A-201ENST00000393077 DNAJA4Q8WW22 397 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms