RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 SKP1P63208 163 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 MRPS6P82932 125 aaKnown RBP13.13□□□□□ -0.31
LCA5-202ENST00000392959 DCLRE1AQ6PJP8 1040 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 GPC2Q8N158 579 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 RTL3Q8N8U3 475 aaKnown RBP13.13□□□□□ -0.31
LCA5-202ENST00000392959 PPP1R14AQ96A00 147 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 NARS2Q96I59 477 aaKnown RBP13.13□□□□□ -0.31
LCA5-202ENST00000392959 QKIQ96PU8 341 aaKnown RBP eCLIP13.13□□□□□ -0.31
LCA5-202ENST00000392959 BTBD9Q96Q07 612 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 ABCG8Q9H221 673 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 OGDHLQ9ULD0 1010 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 MANSC4A6NHS7 340 aaPredicted RBP13.12□□□□□ -0.31
LCA5-202ENST00000392959 KCNU1A8MYU2 1149 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 OR6A2O95222 327 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 COPZ1P61923 177 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 NRG1Q02297 640 aaPredicted RBP13.12□□□□□ -0.31
LCA5-202ENST00000392959 AP5B1Q2VPB7 878 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 C9orf57Q5W0N0 161 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 SLCO6A1Q86UG4 719 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 LPPQ93052 612 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 TSSK3Q96PN8 268 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 GATA5Q9BWX5 397 aaPredicted RBP13.12□□□□□ -0.31
LCA5-202ENST00000392959 NXF3Q9H4D5 531 aaKnown RBP13.12□□□□□ -0.31
LCA5-202ENST00000392959 TIMMDC1Q9NPL8 285 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 NOCTQ9UK39 431 aaKnown RBP13.12□□□□□ -0.31
LCA5-202ENST00000392959 DERAQ9Y315 318 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 PRMT5O14744 637 aaPredicted RBP13.12□□□□□ -0.31
LCA5-202ENST00000392959 TLR5O60602 858 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 FTH1P02794 183 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 ALOX5P09917 674 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 CSH1P0DML2 217 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 CSH2P0DML3 217 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 ADSLP30566 484 aaPredicted RBP13.12□□□□□ -0.31
LCA5-202ENST00000392959 BIKQ13323 160 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 GRM3Q14832 879 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 C6orf52Q5T4I8 152 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 SDHAF4Q5VUM1 108 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 SLC26A9Q7LBE3 791 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 R3HCC1LQ7Z5L2 792 aaKnown RBP13.12□□□□□ -0.31
LCA5-202ENST00000392959 SUSD6Q92537 303 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 MFSD3Q96ES6 412 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 ACSS2Q9NR19 701 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 TAS2R1Q9NYW7 299 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 SSR3Q9UNL2 185 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 SAMD4AQ9UPU9 718 aaKnown RBP13.12□□□□□ -0.31
LCA5-202ENST00000392959 MDM4O15151 490 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 FARP2O94887 1054 aaPredicted RBP13.12□□□□□ -0.31
LCA5-202ENST00000392959 KLHL18O94889 574 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 AP2A1O95782 977 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 PRG2P13727 222 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 CTPS1P17812 591 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 ITGAXP20702 1163 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 SLC6A2P23975 617 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 OLR1P78380 273 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 FNDC3BQ53EP0 1204 aaKnown RBP13.12□□□□□ -0.31
LCA5-202ENST00000392959 PPP1R15BQ5SWA1 713 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 PMF1Q6P1K2 205 aa13.12□□□□□ -0.31
LCA5-202ENST00000392959 THG1LQ9NWX6 298 aaKnown RBP13.12□□□□□ -0.31
LCA5-202ENST00000392959 PKMP14618 531 aaKnown RBP13.11□□□□□ -0.31
LCA5-202ENST00000392959 BMP7P18075 431 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 GNPDA1P46926 289 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 CRYBB1P53674 252 aaPredicted RBP13.11□□□□□ -0.31
LCA5-202ENST00000392959 PSMD4P55036 377 aaKnown RBP13.11□□□□□ -0.31
LCA5-202ENST00000392959 PYDC2Q56P42 97 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 DRICH1Q6PGQ1 229 aaPredicted RBP13.11□□□□□ -0.31
LCA5-202ENST00000392959 UNC93B1Q9H1C4 597 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 TRIM39Q9HCM9 518 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.11□□□□□ -0.31
LCA5-202ENST00000392959 C5orf60A6NFR6 353 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 TBL1XO60907 577 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 SERPINB7O75635 380 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 CD48P09326 243 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 TLX1P31314 330 aaPredicted RBP13.11□□□□□ -0.31
LCA5-202ENST00000392959 MTAPQ13126 283 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 PPM1LQ5SGD2 360 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 ANXA8L1Q5VT79 327 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 OTOP3Q7RTS5 596 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 THAP5Q7Z6K1 395 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 COMMD2Q86X83 199 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 ST3GAL5Q9UNP4 418 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 NEURL4Q96JN8 1562 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 NDUFB5O43674 189 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 PEX2P28328 305 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 HNF4AP41235 474 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 SMAD3P84022 425 aaKnown RBP13.11□□□□□ -0.31
LCA5-202ENST00000392959 HSDL1Q3SXM5 330 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 METTL3Q86U44 580 aaKnown RBP13.11□□□□□ -0.31
LCA5-202ENST00000392959 PTCD2Q8WV60 388 aaKnown RBP13.11□□□□□ -0.31
LCA5-202ENST00000392959 TDRD1Q9BXT4 1180 aaKnown RBP13.11□□□□□ -0.31
LCA5-202ENST00000392959 AGO3Q9H9G7 860 aaKnown RBP13.11□□□□□ -0.31
LCA5-202ENST00000392959 TMPRSS4Q9NRS4 437 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 SMPD3Q9NY59 655 aaPredicted RBP13.11□□□□□ -0.31
LCA5-202ENST00000392959 XYLBO75191 536 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 ABRQ12979 859 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 CCNIQ14094 377 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 NOMO2Q5JPE7 1267 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 CWF19L1Q69YN2 538 aaKnown RBP13.11□□□□□ -0.31
LCA5-202ENST00000392959 CRTC3Q6UUV7 619 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 CBR4Q8N4T8 237 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 HJURPQ8NCD3 748 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms