RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 ETV6P41212 452 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 GARSP41250 739 aaKnown RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 NR4A2P43354 598 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 POLD2P49005 469 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 ALDH7A1P49419 539 aaKnown RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 APLP1P51693 650 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 TKTL1P51854 596 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 NKX2-5P52952 324 aaPredicted RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 RAD23AP54725 363 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 ARSFP54793 590 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 EEFSECP57772 596 aaKnown RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 TAS2R39P59534 338 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 ARPC4P59998 168 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 PITX1P78337 314 aaPredicted RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 PPP2R2BQ00005 443 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 NFKB2Q00653 900 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 GALK2Q01415 458 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 SLC6A3Q01959 620 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 SP2Q02086 613 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 CD47Q08722 323 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 FADDQ13158 208 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 STX5Q13190 355 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 BFSP2Q13515 415 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 SLC12A1Q13621 1099 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 RCAN2Q14206 197 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 SELPLGQ14242 412 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 ZNF460Q14592 562 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 SNX17Q15036 470 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 MAPRE2Q15555 327 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 MAPRE1Q15691 268 aaKnown RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 AMHR2Q16671 573 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 HIST2H2ACQ16777 129 aaPredicted RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 CDO1Q16878 200 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 DUOXA2Q1HG44 320 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 TRIM71Q2Q1W2 868 aaKnown RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 GOLGA7BQ2TAP0 167 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 MAP7D1Q3KQU3 841 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 UNC50Q53HI1 259 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 Q5BKY6 102 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 ZNF667Q5HYK9 610 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 RBM48Q5RL73 367 aaKnown RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 C6orf141Q5SZD1 244 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 MFSD4BQ5TF39 518 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 FKBP1CQ5VVH2 108 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 ARHGAP17Q68EM7 881 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 ANKRD34AQ69YU3 496 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 IQSEC1Q6DN90 963 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 SIGIRRQ6IA17 410 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 DENND5AQ6IQ26 1287 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 SWSAP1Q6NVH7 229 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 KIAA0408Q6ZU52 694 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 FRA10AC1Q70Z53 315 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 BEND5Q7L4P6 421 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 CATSPER4Q7RTX7 472 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 LIMS2Q7Z4I7 341 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 VN1R5Q7Z5H4 357 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 R3HCC1LQ7Z5L2 792 aaKnown RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 PODNQ7Z5L7 613 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 ZBTB33Q86T24 672 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 SLC22A16Q86VW1 577 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 KCNMB4Q86W47 210 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 BPHLQ86WA6 291 aaPredicted RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 SLC41A1Q8IVJ1 513 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 DDIASQ8IXT1 998 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 TBC1D21Q8IYX1 336 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 LGI2Q8N0V4 545 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 SIX6OS1Q8N1H7 587 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 PYROXD2Q8N2H3 581 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 CLIP4Q8N3C7 705 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 NPWQ8N729 165 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 ARL10Q8N8L6 244 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 ZNF280CQ8ND82 737 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 BPIFB6Q8NFQ5 453 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 OR13J1Q8NGT2 312 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 OR6F1Q8NGZ6 308 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 NDNFQ8TB73 568 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 UBA3Q8TBC4 463 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 SH3RF2Q8TEC5 729 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 CLEC4CQ8WTT0 213 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 TSPEARQ8WU66 669 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 CYGBQ8WWM9 190 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 ATL1Q8WXF7 558 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 S100ZQ8WXG8 99 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 HPS1Q92902 700 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 NT5C3BQ969T7 300 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 NXNL1Q96CM4 212 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 HDAC11Q96DB2 347 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 L3HYPDHQ96EM0 354 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 ATXN7L3BQ96GX2 97 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 PDLIM5Q96HC4 596 aaKnown RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 TMEM176AQ96HP8 235 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 REXO5Q96IC2 774 aaKnown RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 RPL10LQ96L21 214 aaKnown RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 RDH12Q96NR8 316 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 SDHCQ99643 169 aaPredicted RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 MRPL57Q9BQC6 102 aaKnown RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 FEM1AQ9BSK4 669 aa3.45□□□□□ -1.86
TRAV39-201ENST00000390466 MTG1Q9BT17 334 aaPredicted RBP3.45□□□□□ -1.86
TRAV39-201ENST00000390466 EFHD1Q9BUP0 239 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms