RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 SHC3Q92529 594 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 NUS1Q96E22 293 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 ELMO2Q96JJ3 720 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 FAM81BQ96LP2 452 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 ZNF641Q96N77 438 aaPredicted RBP9.63□□□□□ -0.87
IFT88-203ENST00000389373 ZNF768Q9H5H4 540 aaKnown RBP9.63□□□□□ -0.87
IFT88-203ENST00000389373 GDPD2Q9HCC8 539 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 METTL5Q9NRN9 209 aaKnown RBP9.63□□□□□ -0.87
IFT88-203ENST00000389373 TRNAU1APQ9NX07 287 aaKnown RBP9.63□□□□□ -0.87
IFT88-203ENST00000389373 RCOR3Q9P2K3 495 aaPredicted RBP9.63□□□□□ -0.87
IFT88-203ENST00000389373 KCND3Q9UK17 655 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 ST14Q9Y5Y6 855 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 TEP1Q99973 2627 aaKnown RBP9.63□□□□□ -0.87
IFT88-203ENST00000389373 BICDL2A1A5D9 508 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 CFAP69A5D8W1 941 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 TCP11X1B4DZS4 312 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 FOXN3O00409 490 aaPredicted RBP9.62□□□□□ -0.87
IFT88-203ENST00000389373 MAP3K6O95382 1288 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 GNA14O95837 355 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 GM2AP17900 193 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 EPHB2P29323 1055 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 SERPINA4P29622 427 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 GABRB2P47870 512 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 CCL11P51671 97 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 PGDP52209 483 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 PMS2P54278 862 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 NRG1Q02297 640 aaPredicted RBP9.62□□□□□ -0.87
IFT88-203ENST00000389373 BCL2L1Q07817 233 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 CHAF1BQ13112 559 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 GBP6Q6ZN66 633 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 MARK2Q7KZI7 788 aaKnown RBP9.62□□□□□ -0.87
IFT88-203ENST00000389373 SRLQ86TD4 932 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 RASGRP3Q8IV61 690 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 HSCBQ8IWL3 235 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 TP53INP2Q8IXH6 220 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 PYROXD2Q8N2H3 581 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 SLC37A2Q8TED4 501 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 CPA5Q8WXQ8 436 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 STAMBPL1Q96FJ0 436 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 SLC25A23Q9BV35 468 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 MFRPQ9BY79 579 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 TRIM55Q9BYV6 548 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 FRMD8Q9BZ67 464 aaPredicted RBP9.62□□□□□ -0.87
IFT88-203ENST00000389373 SLC29A3Q9BZD2 475 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 RETREG1Q9H6L5 497 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 NOL6Q9H6R4 1146 aaKnown RBP9.62□□□□□ -0.87
IFT88-203ENST00000389373 ATP13A3Q9H7F0 1226 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 DONSONQ9NYP3 566 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 PDP2Q9P2J9 529 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 APEX2Q9UBZ4 518 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 TMEM59LQ9UK28 342 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 DNAJC12Q9UKB3 198 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 AJAP1Q9UKB5 411 aaPredicted RBP9.62□□□□□ -0.87
IFT88-203ENST00000389373 TMEM98Q9Y2Y6 226 aa9.62□□□□□ -0.87
IFT88-203ENST00000389373 DOCK4Q8N1I0 1966 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 J3KR12 359 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 CREB3O43889 395 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 CREG1O75629 220 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 KIAA0754O94854 1291 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 CCNYL3P0C7X3 344 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 CASP14P31944 242 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 SCNN1AP37088 669 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 RGRP47804 291 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 HHEXQ03014 270 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 MAP7Q14244 749 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 NAA30Q147X3 362 aaPredicted RBP9.61□□□□□ -0.87
IFT88-203ENST00000389373 EXOC3L4Q17RC7 722 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 AFMIDQ63HM1 303 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 RAET1GQ6H3X3 334 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 DPPA4Q7L190 304 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 BNIPLQ7Z465 357 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 CCDC185Q8N715 623 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 RTL3Q8N8U3 475 aaKnown RBP9.61□□□□□ -0.87
IFT88-203ENST00000389373 MSANTD4Q8NCY6 345 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 RXFP2Q8WXD0 754 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 MOCOSQ96EN8 888 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 TCTN2Q96GX1 697 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 OR2M4Q96R27 311 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 TUBGCP5Q96RT8 1024 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 TEX101Q9BY14 249 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 SLAMF7Q9NQ25 335 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 B4GALT6Q9UBX8 382 aa9.61□□□□□ -0.87
IFT88-203ENST00000389373 ERRFI1Q9UJM3 462 aaPredicted RBP9.61□□□□□ -0.87
IFT88-203ENST00000389373 ARHGAP10A1A4S6 786 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 PALMO75781 387 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 NDUFA10O95299 355 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 LDLRP01130 860 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 SDC4P31431 198 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 PPP1R2P41236 205 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 SEPHS1P49903 392 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 MARSP56192 900 aaKnown RBP9.6□□□□□ -0.87
IFT88-203ENST00000389373 YBEYP58557 167 aaPredicted RBP9.6□□□□□ -0.87
IFT88-203ENST00000389373 BPIFB4P59827 614 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 POLR2LP62875 67 aaKnown RBP9.6□□□□□ -0.87
IFT88-203ENST00000389373 CDK3Q00526 305 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 SEMA5AQ13591 1074 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 DNASE1L3Q13609 305 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 CCDC14Q49A88 953 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 SCYL2Q6P3W7 929 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 WDR74Q6RFH5 385 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms