RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 EME2A4GXA9 379 aaPredicted RBP5.86□□□□□ -1.47
RFX3-204ENST00000382004 ITGB1P05556 798 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 MSX2P35548 267 aaPredicted RBP5.86□□□□□ -1.47
RFX3-204ENST00000382004 SLC5A9Q2M3M2 681 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 PARP6Q2NL67 630 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 ZDHHC17Q8IUH5 632 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 AGAP11Q8TF27 550 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 RCN3Q96D15 328 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 CCDC120Q96HB5 630 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 C2orf49Q9BVC5 232 aaPredicted RBP5.86□□□□□ -1.47
RFX3-204ENST00000382004 TMPRSS4Q9NRS4 437 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 METTL21EPA6NDL7 271 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 LACTBL1A8MY62 500 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 GNRH1P01148 92 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 CYP17A1P05093 508 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 PRLRP16471 622 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 SSR2P43308 183 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 IST1P53990 364 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 OLR1P78380 273 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 ZNF844Q08AG5 666 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 SEMA5AQ13591 1074 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 PCID2Q5JVF3 399 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 AKAP1Q92667 903 aaKnown RBP eCLIP5.86□□□□□ -1.47
RFX3-204ENST00000382004 BORCS5Q969J3 196 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 LINGO1Q96FE5 620 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 FEM1CQ96JP0 617 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 SLC39A8Q9C0K1 460 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 SGK2Q9HBY8 427 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 PARPBPQ9NWS1 579 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 GRHL1Q9NZI5 618 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 AK5Q9Y6K8 562 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 ZNF609O15014 1411 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 DDX3YO15523 660 aaKnown RBP5.86□□□□□ -1.47
RFX3-204ENST00000382004 OTCP00480 354 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 RLN2P04090 185 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 PTX3P26022 381 aaPredicted RBP5.86□□□□□ -1.47
RFX3-204ENST00000382004 ATP5C1P36542 298 aaKnown RBP5.86□□□□□ -1.47
RFX3-204ENST00000382004 ZNF268Q14587 947 aaPredicted RBP5.86□□□□□ -1.47
RFX3-204ENST00000382004 PTPRNQ16849 979 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 LYPLAL1Q5VWZ2 237 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 SLC9A4Q6AI14 798 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 SV2AQ7L0J3 742 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 GPR135Q8IZ08 494 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 CKAP2Q8WWK9 683 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 TCF12Q99081 682 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 NPAS2Q99743 824 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 SMURF1Q9HCE7 757 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 ATP7BP35670 1465 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 RIIAD1A6NNX1 92 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 GRIN3BO60391 1043 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 FSBPO95073 299 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 IFI30P13284 250 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 TUFMP49411 452 aaKnown RBP5.86□□□□□ -1.47
RFX3-204ENST00000382004 RGS19P49795 217 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 CBX2Q14781 532 aaPredicted RBP5.86□□□□□ -1.47
RFX3-204ENST00000382004 EGFLAMQ63HQ2 1017 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 FOXRED2Q8IWF2 684 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 PCDH19Q8TAB3 1148 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 NKX2-3Q8TAU0 364 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 PIWIL2Q8TC59 973 aaKnown RBP5.86□□□□□ -1.47
RFX3-204ENST00000382004 KCTD4Q8WVF5 259 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 COMMD4Q9H0A8 199 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 RNF121Q9H920 327 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 TMEM27Q9HBJ8 222 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 CCNB1IP1Q9NPC3 277 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 CDH7Q9ULB5 785 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 USP20Q9Y2K6 914 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 PCDHGC5Q9Y5F6 944 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 MAU2Q9Y6X3 613 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 CLASP1Q7Z460 1538 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 H3BRB1 525 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 FGBP02675 491 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 ZNF132P52740 706 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 SLC6A3Q01959 620 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 BNIP2Q12982 314 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 ACVR2BQ13705 512 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 PPP1R15BQ5SWA1 713 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 ZNF697Q5TEC3 545 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 PAPD7Q5XG87 772 aaKnown RBP5.86□□□□□ -1.47
RFX3-204ENST00000382004 CHSY3Q70JA7 882 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 DHDDSQ86SQ9 333 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 FAM83AQ86UY5 434 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 ADAMTS15Q8TE58 950 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 ERMAPQ96PL5 475 aaPredicted RBP5.86□□□□□ -1.47
RFX3-204ENST00000382004 GORASP1Q9BQQ3 440 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 ULBP1Q9BZM6 244 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 METTL8Q9H825 291 aaKnown RBP5.86□□□□□ -1.47
RFX3-204ENST00000382004 ABCC13Q9NSE7 274 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 MRPS33Q9Y291 106 aaKnown RBP5.86□□□□□ -1.47
RFX3-204ENST00000382004 ALG5Q9Y673 324 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 ASTN2O75129 1339 aaPredicted RBP5.86□□□□□ -1.47
RFX3-204ENST00000382004 SLC30A4O14863 429 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 FFAR2O15552 330 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 CAPN15O75808 1086 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 SLC25A14O95258 325 aaPredicted RBP5.86□□□□□ -1.47
RFX3-204ENST00000382004 HNRNPLP14866 589 aaKnown RBP eCLIP5.86□□□□□ -1.471e-6■■■□□ 17.9
RFX3-204ENST00000382004 USP6P35125 1406 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 NAE1Q13564 534 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 FAM151BQ6UXP7 276 aa5.86□□□□□ -1.47
RFX3-204ENST00000382004 ADGRG6Q86SQ4 1221 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms