RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 PPEF2O14830 753 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 TRIM24O15164 1050 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 PGK1P00558 417 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 CYP3A5P20815 502 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 PAX3P23760 479 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 GPC1P35052 558 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 INCA1Q0VD86 236 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 CPSF6Q16630 551 aaKnown RBP eCLIP12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 FBXO48Q5FWF7 155 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 SPANXN2Q5MJ10 180 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 SPATA19Q7Z5L4 167 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 C11orf96Q7Z7L8 435 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 C11orf74Q86VG3 221 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 PROSER1Q86XN7 944 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 DCBLD1Q8N8Z6 715 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 LEMD2Q8NC56 503 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 ARRDC4Q8NCT1 418 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 OR4K2Q8NGD2 314 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 IRGQQ8WZA9 623 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 MED8Q96G25 268 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 UROC1Q96N76 676 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 TMEM245Q9H330 911 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 GMPPBQ9Y5P6 360 aa12.72□□□□□ -0.37
DNMT3A-204ENST00000380756 C4AP0C0L4 1744 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 C4BP0C0L5 1744 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 E9PAM4 449 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 STX16-NPEPL1H3BU86 382 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 TLR5O60602 858 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 RPP40O75818 363 aaKnown RBP12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 H6PDO95479 791 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 GPIP06744 558 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 CKMT2P17540 419 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 SLC1A2P43004 574 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 RABGGTBP53611 331 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 USP46P62068 366 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 LIPEQ05469 1076 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 LCP2Q13094 533 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 HNRNPDQ14103 355 aaKnown RBP12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 PCLAFQ15004 111 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 B3GNT9Q6UX72 402 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 TMEM159Q96B96 161 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 CXorf21Q9HAI6 301 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 MIEF1Q9NQG6 463 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 DYRK1BQ9Y463 629 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 CCDC88AQ3V6T2 1871 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 PKMP14618 531 aaKnown RBP12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 TPP2P29144 1249 aaPredicted RBP12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 PBLDP30039 288 aaPredicted RBP12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 INO80DQ53TQ3 878 aaPredicted RBP12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 ARMCX4Q5H9R4 360 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 ARMC4Q5T2S8 1044 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 CNSTQ6PJW8 725 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 TRAF7Q6Q0C0 670 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 SYTL1Q8IYJ3 562 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 SOCS4Q8WXH5 440 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 GMLQ99445 158 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 TMPRSS4Q9NRS4 437 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 PCDHB9Q9Y5E1 797 aa12.71□□□□□ -0.37
DNMT3A-204ENST00000380756 A0A1W2PQH9 124 aa12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 MOXD2PA6NHM9 499 aa12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 SCAMP3O14828 347 aaKnown RBP12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 ZBTB14O43829 449 aa12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 RHOQP17081 205 aa12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 WARSP23381 471 aaKnown RBP12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 HTR7P34969 479 aa12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 RPS9P46781 194 aaKnown RBP12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 CLCNKBP51801 687 aa12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 SLC5A3P53794 718 aa12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 GRIK3Q13003 919 aa12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 CAMK2GQ13555 558 aaPredicted RBP12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 C1DQ13901 141 aaKnown RBP12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 STARD3Q14849 445 aa12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 HERC3Q15034 1050 aa12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 RALGPS2Q86X27 583 aaPredicted RBP12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 ROPN1LQ96C74 230 aa12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 PIWIL1Q96J94 861 aaKnown RBP12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 DNAJC1Q96KC8 554 aaKnown RBP12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 ADI1Q9BV57 179 aa12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 AGO1Q9UL18 857 aaKnown RBP12.71□□□□□ -0.38
DNMT3A-204ENST00000380756 PNMA8CA0A1B0GUJ8 204 aa12.7□□□□□ -0.38
DNMT3A-204ENST00000380756 PDZK1P1A8MUH7 402 aa12.7□□□□□ -0.38
DNMT3A-204ENST00000380756 COX7A2P14406 83 aa12.7□□□□□ -0.38
DNMT3A-204ENST00000380756 ALOX12P18054 663 aa12.7□□□□□ -0.38
DNMT3A-204ENST00000380756 TYMPP19971 482 aa12.7□□□□□ -0.38
DNMT3A-204ENST00000380756 MC4RP32245 332 aa12.7□□□□□ -0.38
DNMT3A-204ENST00000380756 EPHB3P54753 998 aa12.7□□□□□ -0.38
DNMT3A-204ENST00000380756 MAP2K5Q13163 448 aa12.7□□□□□ -0.38
DNMT3A-204ENST00000380756 RFX4Q33E94 735 aa12.7□□□□□ -0.38
DNMT3A-204ENST00000380756 HEATR4Q86WZ0 1026 aa12.7□□□□□ -0.38
DNMT3A-204ENST00000380756 AHI1Q8N157 1196 aa12.7□□□□□ -0.38
DNMT3A-204ENST00000380756 GPR152Q8TDT2 470 aa12.7□□□□□ -0.38
DNMT3A-204ENST00000380756 BTN2A3PQ96KV6 586 aa12.7□□□□□ -0.38
DNMT3A-204ENST00000380756 OR52E6Q96RD3 313 aa12.7□□□□□ -0.38
DNMT3A-204ENST00000380756 C2orf49Q9BVC5 232 aaPredicted RBP12.7□□□□□ -0.38
DNMT3A-204ENST00000380756 ALG2Q9H553 416 aa12.7□□□□□ -0.38
DNMT3A-204ENST00000380756 SLC25A13Q9UJS0 675 aa12.7□□□□□ -0.38
DNMT3A-204ENST00000380756 DNMT3LQ9UJW3 386 aa12.7□□□□□ -0.38
DNMT3A-204ENST00000380756 SLC27A5Q9Y2P5 690 aa12.7□□□□□ -0.38
DNMT3A-204ENST00000380756 COPG1Q9Y678 874 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms