RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 ZNF662Q6ZS27 426 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 USP45Q70EL2 814 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 VASH1Q7L8A9 365 aaPredicted RBP9.26□□□□□ -0.93
HMGN1-202ENST00000380747 KDELC2Q7Z4H8 507 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 ABI3BPQ7Z7G0 1075 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 CDKL3Q8IVW4 592 aaPredicted RBP9.26□□□□□ -0.93
HMGN1-202ENST00000380747 NDUFAF2Q8N183 169 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 TP53I13Q8NBR0 393 aaPredicted RBP9.26□□□□□ -0.93
HMGN1-202ENST00000380747 DENND6BQ8NEG7 585 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 ACTL9Q8TC94 416 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 SETD7Q8WTS6 366 aaKnown RBP9.26□□□□□ -0.93
HMGN1-202ENST00000380747 PIH1D2Q8WWB5 315 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 HTR3CQ8WXA8 447 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 SMIM14Q96QK8 99 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 RBM15Q96T37 977 aaKnown RBP eCLIP9.26□□□□□ -0.93
HMGN1-202ENST00000380747 KLF6Q99612 283 aaPredicted RBP9.26□□□□□ -0.93
HMGN1-202ENST00000380747 FERMT1Q9BQL6 677 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 GLOD4Q9HC38 313 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 PCDH9Q9HC56 1237 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 MBNL1Q9NR56 388 aaKnown RBP9.26□□□□□ -0.93
HMGN1-202ENST00000380747 A0A1B0GTQ1 180 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 SPAARA0A1B0GVQ0 90 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 CFAP69A5D8W1 941 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 NPIPB15A6NHN6 443 aaPredicted RBP9.25□□□□□ -0.93
HMGN1-202ENST00000380747 FZD6O60353 706 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 DFNA5O60443 496 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 RECQL5O94762 991 aaPredicted RBP9.25□□□□□ -0.93
HMGN1-202ENST00000380747 HEXIM1O94992 359 aaKnown RBP9.25□□□□□ -0.93
HMGN1-202ENST00000380747 ITGAVP06756 1048 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 MMP2P08253 660 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 ZNF883P0CG24 379 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 RBP3P10745 1247 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 NFKB1P19838 968 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 HNF1BP35680 557 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 RABIFP47224 123 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 ARRB1P49407 418 aaPredicted RBP9.25□□□□□ -0.93
HMGN1-202ENST00000380747 THOP1P52888 689 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 RPL26P61254 145 aaKnown RBP9.25□□□□□ -0.93
HMGN1-202ENST00000380747 PDE1CQ14123 709 aaPredicted RBP9.25□□□□□ -0.93
HMGN1-202ENST00000380747 ARHGEF7Q14155 803 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 SUZ12Q15022 739 aaKnown RBP9.25□□□□□ -0.93
HMGN1-202ENST00000380747 CNGA3Q16281 694 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 PCSK7Q16549 785 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 WSCD2Q2TBF2 565 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 OXLD1Q5BKU9 147 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 ZNF542PQ5EBM4 170 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 MEI1Q5TIA1 1274 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 LIPIQ6XZB0 460 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 PID1Q7Z2X4 250 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 TSPAN33Q86UF1 283 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 PDZD3Q86UT5 571 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 GATAD2AQ86YP4 633 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 DCP2Q8IU60 420 aaKnown RBP9.25□□□□□ -0.93
HMGN1-202ENST00000380747 NAXDQ8IW45 347 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 ZNF567Q8N184 647 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 OXR1Q8N573 874 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 SPATA22Q8NHS9 363 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 CENPTQ96BT3 561 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 SCRN2Q96FV2 425 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 IMP4Q96G21 291 aaKnown RBP9.25□□□□□ -0.93
HMGN1-202ENST00000380747 TEKT5Q96M29 485 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 CAMK1GQ96NX5 476 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 SLC25A51Q9H1U9 297 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 ERVMER34-1Q9H9K5 563 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 RSPH14Q9UHP6 348 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 RPL26L1Q9UNX3 145 aaKnown RBP9.25□□□□□ -0.93
HMGN1-202ENST00000380747 MAP4K5Q9Y4K4 846 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 ADAMTS9Q9P2N4 1935 aa9.25□□□□□ -0.93
HMGN1-202ENST00000380747 SHROOM3Q8TF72 1996 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 A0A0U1RQS6 177 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 TCRBV7S2A1N4TA0A589 114 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 CAPN8A6NHC0 703 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 YKT6O15498 198 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 KCNN4O15554 427 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 ZSCAN12O43309 604 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 SDC3O75056 442 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 PMPCBO75439 489 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 STK10O94804 968 aaKnown RBP9.24□□□□□ -0.93
HMGN1-202ENST00000380747 MT-CYBP00156 380 aaPredicted RBP9.24□□□□□ -0.93
HMGN1-202ENST00000380747 PRLP01236 227 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 LHCGRP22888 699 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 EPHA8P29322 1005 aaPredicted RBP9.24□□□□□ -0.93
HMGN1-202ENST00000380747 CD68P34810 354 aaPredicted RBP9.24□□□□□ -0.93
HMGN1-202ENST00000380747 PFN3P60673 137 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 CDK18Q07002 472 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 GALNT3Q14435 633 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 INPP5AQ14642 412 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 SHBQ15464 509 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 CCDC70Q6NSX1 233 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 HSD11B1LQ7Z5J1 315 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 SLC22A18ASQ8N1D0 253 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 CHCHD4Q8N4Q1 142 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 TRIM58Q8NG06 486 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 RHBDD1Q8TEB9 315 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 UBE2Q2Q8WVN8 375 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 ADAMTS14Q8WXS8 1223 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 IFT43Q96FT9 208 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 COQ10AQ96MF6 247 aa9.24□□□□□ -0.93
HMGN1-202ENST00000380747 MCCC1Q96RQ3 725 aaPredicted RBP9.24□□□□□ -0.93
HMGN1-202ENST00000380747 VAT1Q99536 393 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms