RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.77■□□□□ 0.6
SMN2-202ENST00000380742 CD84Q9UIB8 345 aa18.77■□□□□ 0.6
SMN2-202ENST00000380742 TCAF1Q9Y4C2 921 aa18.77■□□□□ 0.6
SMN2-202ENST00000380742 R4GN57 208 aa18.77■□□□□ 0.6
SMN2-202ENST00000380742 V9GYY5 206 aaPredicted RBP18.77■□□□□ 0.6
SMN2-202ENST00000380742 CCDC78A2IDD5 438 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 HEATR9A2RTY3 570 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 WNT9AO14904 365 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 RAD51BO15315 384 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 SLC31A1O15431 190 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 BPIP17213 487 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 PTGER3P43115 390 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 ARL4CP56559 192 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 TUBB4BP68371 445 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 SGCGQ13326 291 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 BBS9Q3SYG4 887 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 CEP68Q76N32 757 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 ARMCX6Q7L4S7 300 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 CYP2U1Q7Z449 544 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 IFT20Q8IY31 132 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 RAVER1Q8IY67 606 aaKnown RBP18.76■□□□□ 0.59
SMN2-202ENST00000380742 PDIK1LQ8N165 341 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 GPR26Q8NDV2 337 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 PPHLN1Q8NEY8 458 aaKnown RBP18.76■□□□□ 0.59
SMN2-202ENST00000380742 ASB12Q8WXK4 309 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 ZNF778Q96MU6 729 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 KLF6Q99612 283 aaPredicted RBP18.76■□□□□ 0.59
SMN2-202ENST00000380742 ABCG8Q9H221 673 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 FZD3Q9NPG1 666 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 PKD2L2Q9NZM6 624 aa18.76■□□□□ 0.59
SMN2-202ENST00000380742 TP53BP1Q12888 1972 aaPredicted RBP18.75■□□□□ 0.59
SMN2-202ENST00000380742 E7ESA3 106 aa18.75■□□□□ 0.59
SMN2-202ENST00000380742 STX7O15400 261 aaKnown RBP18.75■□□□□ 0.59
SMN2-202ENST00000380742 MAOBP27338 520 aa18.75■□□□□ 0.59
SMN2-202ENST00000380742 PDE1BQ01064 536 aa18.75■□□□□ 0.59
SMN2-202ENST00000380742 CBLBQ13191 982 aa18.75■□□□□ 0.59
SMN2-202ENST00000380742 SIM2Q14190 667 aaPredicted RBP18.75■□□□□ 0.59
SMN2-202ENST00000380742 WSCD2Q2TBF2 565 aa18.75■□□□□ 0.59
SMN2-202ENST00000380742 SETMARQ53H47 684 aaPredicted RBP18.75■□□□□ 0.59
SMN2-202ENST00000380742 SPDYCQ5MJ68 293 aa18.75■□□□□ 0.59
SMN2-202ENST00000380742 TSTD2Q5T7W7 516 aa18.75■□□□□ 0.59
SMN2-202ENST00000380742 IGDCC3Q8IVU1 814 aa18.75■□□□□ 0.59
SMN2-202ENST00000380742 NRSN1Q8IZ57 195 aa18.75■□□□□ 0.59
SMN2-202ENST00000380742 TP53I13Q8NBR0 393 aaPredicted RBP18.75■□□□□ 0.59
SMN2-202ENST00000380742 SNX19Q92543 992 aa18.75■□□□□ 0.59
SMN2-202ENST00000380742 FOXJ1Q92949 421 aa18.75■□□□□ 0.59
SMN2-202ENST00000380742 SCAMP4Q969E2 229 aa18.75■□□□□ 0.59
SMN2-202ENST00000380742 CENPTQ96BT3 561 aa18.75■□□□□ 0.59
SMN2-202ENST00000380742 NUS1Q96E22 293 aa18.75■□□□□ 0.59
SMN2-202ENST00000380742 DNAJC1Q96KC8 554 aaKnown RBP18.75■□□□□ 0.59
SMN2-202ENST00000380742 MYOCQ99972 504 aa18.75■□□□□ 0.59
SMN2-202ENST00000380742 TRIM56Q9BRZ2 755 aaKnown RBP18.75■□□□□ 0.59
SMN2-202ENST00000380742 KIFC1Q9BW19 673 aa18.75■□□□□ 0.59
SMN2-202ENST00000380742 MBNL1Q9NR56 388 aaKnown RBP18.75■□□□□ 0.59
SMN2-202ENST00000380742 SLC2A6Q9UGQ3 507 aa18.75■□□□□ 0.59
SMN2-202ENST00000380742 SOX13Q9UN79 622 aa18.75■□□□□ 0.59
SMN2-202ENST00000380742 PKP3Q9Y446 797 aa18.75■□□□□ 0.59
SMN2-202ENST00000380742 SLCO1B1Q9Y6L6 691 aa18.75■□□□□ 0.59
SMN2-202ENST00000380742 A0A1W2PPC4 97 aa18.74■□□□□ 0.59
SMN2-202ENST00000380742 RGSL1A5PLK6 1076 aa18.74■□□□□ 0.59
SMN2-202ENST00000380742 MEI4A8MW99 385 aa18.74■□□□□ 0.59
SMN2-202ENST00000380742 CCL22O00626 93 aa18.74■□□□□ 0.59
SMN2-202ENST00000380742 PSMA3P25788 255 aa18.74■□□□□ 0.59
SMN2-202ENST00000380742 NMBRP28336 390 aa18.74■□□□□ 0.59
SMN2-202ENST00000380742 TMPRSS15P98073 1019 aa18.74■□□□□ 0.59
SMN2-202ENST00000380742 PDIA2Q13087 525 aaKnown RBP18.74■□□□□ 0.59
SMN2-202ENST00000380742 CUL1Q13616 776 aa18.74■□□□□ 0.59
SMN2-202ENST00000380742 LAMB3Q13751 1172 aa18.74■□□□□ 0.59
SMN2-202ENST00000380742 HLTFQ14527 1009 aaKnown RBP eCLIP18.74■□□□□ 0.59
SMN2-202ENST00000380742 ERCC6LQ2NKX8 1250 aa18.74■□□□□ 0.59
SMN2-202ENST00000380742 DNAJC21Q5F1R6 531 aaKnown RBP18.74■□□□□ 0.59
SMN2-202ENST00000380742 HP1BP3Q5SSJ5 553 aaPredicted RBP18.74■□□□□ 0.59
SMN2-202ENST00000380742 CASC4Q6P4E1 433 aa18.74■□□□□ 0.59
SMN2-202ENST00000380742 MICALCLQ6ZW33 695 aa18.74■□□□□ 0.59
SMN2-202ENST00000380742 PELI3Q8N2H9 469 aa18.74■□□□□ 0.59
SMN2-202ENST00000380742 STYXQ8WUJ0 223 aa18.74■□□□□ 0.59
SMN2-202ENST00000380742 UBXN4Q92575 508 aa18.74■□□□□ 0.59
SMN2-202ENST00000380742 LENG8Q96PV6 779 aaPredicted RBP18.74■□□□□ 0.59
SMN2-202ENST00000380742 WDR83Q9BRX9 315 aaKnown RBP18.74■□□□□ 0.59
SMN2-202ENST00000380742 FAM129AQ9BZQ8 928 aa18.74■□□□□ 0.59
SMN2-202ENST00000380742 MRM3Q9HC36 420 aaKnown RBP18.74■□□□□ 0.59
SMN2-202ENST00000380742 NLE1Q9NVX2 485 aaPredicted RBP18.74■□□□□ 0.59
SMN2-202ENST00000380742 EIF2B4Q9UI10 523 aaKnown RBP18.74■□□□□ 0.59
SMN2-202ENST00000380742 TEX264Q9Y6I9 313 aa18.74■□□□□ 0.59
SMN2-202ENST00000380742 HNRNPA2B1P22626 353 aaKnown RBP18.73■□□□□ 0.59
SMN2-202ENST00000380742 CD27P26842 260 aa18.73■□□□□ 0.59
SMN2-202ENST00000380742 NUDT1P36639 197 aa18.73■□□□□ 0.59
SMN2-202ENST00000380742 ELK3P41970 407 aa18.73■□□□□ 0.59
SMN2-202ENST00000380742 DHPSP49366 369 aaPredicted RBP18.73■□□□□ 0.59
SMN2-202ENST00000380742 FASTKD3Q14CZ7 662 aaKnown RBP18.73■□□□□ 0.59
SMN2-202ENST00000380742 LRRC14Q15048 493 aa18.73■□□□□ 0.59
SMN2-202ENST00000380742 IRF4Q15306 451 aa18.73■□□□□ 0.59
SMN2-202ENST00000380742 ELF2Q15723 593 aa18.73■□□□□ 0.59
SMN2-202ENST00000380742 ALS2CLQ60I27 953 aa18.73■□□□□ 0.59
SMN2-202ENST00000380742 ESRP1Q6NXG1 681 aaKnown RBP18.73■□□□□ 0.59
SMN2-202ENST00000380742 CES3Q6UWW8 571 aa18.73■□□□□ 0.59
SMN2-202ENST00000380742 PRR23BQ6ZRT6 265 aa18.73■□□□□ 0.59
SMN2-202ENST00000380742 ZNF765Q7L2R6 523 aa18.73■□□□□ 0.59
SMN2-202ENST00000380742 NLRP9Q7RTR0 991 aa18.73■□□□□ 0.59
SMN2-202ENST00000380742 PLA2G15Q8NCC3 412 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms