RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 SUOXP51687 545 aa21.55■■□□□ 1.04
TRIM54-202ENST00000380075 NFKB2Q00653 900 aa21.55■■□□□ 1.04
TRIM54-202ENST00000380075 DSG1Q02413 1049 aa21.55■■□□□ 1.04
TRIM54-202ENST00000380075 FBXW8Q8N3Y1 598 aa21.55■■□□□ 1.04
TRIM54-202ENST00000380075 CEP70Q8NHQ1 597 aa21.55■■□□□ 1.04
TRIM54-202ENST00000380075 MOCOSQ96EN8 888 aa21.55■■□□□ 1.04
TRIM54-202ENST00000380075 SGF29Q96ES7 293 aa21.55■■□□□ 1.04
TRIM54-202ENST00000380075 DNAJC1Q96KC8 554 aaKnown RBP21.55■■□□□ 1.04
TRIM54-202ENST00000380075 DDX50Q9BQ39 737 aaKnown RBP21.55■■□□□ 1.04
TRIM54-202ENST00000380075 INTS10Q9NVR2 710 aaKnown RBP21.55■■□□□ 1.04
TRIM54-202ENST00000380075 EYSQ5T1H1 3165 aa21.55■■□□□ 1.04
TRIM54-202ENST00000380075 HIDE1A8MVS5 230 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 MAP3K7O43318 606 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 COCHO43405 550 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 URODP06132 367 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 CA8P35219 290 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 CDKN2DP55273 166 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 TBL3Q12788 808 aaKnown RBP21.54■■□□□ 1.04
TRIM54-202ENST00000380075 CYLC2Q14093 348 aaPredicted RBP21.54■■□□□ 1.04
TRIM54-202ENST00000380075 TPGS2Q68CL5 300 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 RNF135Q8IUD6 432 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 OR7D4Q8NG98 312 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 OR4L1Q8NH43 312 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 NRG4Q8WWG1 115 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 MRPL38Q96DV4 380 aaKnown RBP21.54■■□□□ 1.04
TRIM54-202ENST00000380075 SERPINI1Q99574 410 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 LMAN2LQ9H0V9 348 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 MRPL17Q9NRX2 175 aaKnown RBP21.54■■□□□ 1.04
TRIM54-202ENST00000380075 CATSPERZQ9NTU4 200 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 KCTD3Q9Y597 815 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 ARL5AQ9Y689 179 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 CHD5Q8TDI0 1954 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.54■■□□□ 1.04
TRIM54-202ENST00000380075 A0A1B0GVM2 712 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 TCAF2A6NFQ2 919 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 PSMA3P25788 255 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 PPP3CCP48454 512 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 MTTPP55157 894 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 ZNF177Q13360 481 aaPredicted RBP21.54■■□□□ 1.04
TRIM54-202ENST00000380075 GALNT3Q14435 633 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 PDCD2Q16342 344 aaPredicted RBP21.54■■□□□ 1.04
TRIM54-202ENST00000380075 TYSND1Q2T9J0 566 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 DENND1CQ8IV53 801 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 L3HYPDHQ96EM0 354 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 UNKQ9C0B0 810 aaKnown RBP21.54■■□□□ 1.04
TRIM54-202ENST00000380075 ZBTB26Q9HCK0 441 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 NLE1Q9NVX2 485 aaPredicted RBP21.54■■□□□ 1.04
TRIM54-202ENST00000380075 GTSE1Q9NYZ3 720 aa21.54■■□□□ 1.04
TRIM54-202ENST00000380075 CCDC162PA2VCL2 907 aa21.53■■□□□ 1.04
TRIM54-202ENST00000380075 INSIG1O15503 277 aa21.53■■□□□ 1.04
TRIM54-202ENST00000380075 LILRB3O75022 631 aa21.53■■□□□ 1.04
TRIM54-202ENST00000380075 RHOCP08134 193 aa21.53■■□□□ 1.04
TRIM54-202ENST00000380075 HMGA1P17096 107 aaKnown RBP21.53■■□□□ 1.04
TRIM54-202ENST00000380075 IMPDH1P20839 514 aa21.53■■□□□ 1.04
TRIM54-202ENST00000380075 SP100P23497 879 aaPredicted RBP21.53■■□□□ 1.04
TRIM54-202ENST00000380075 NXNQ6DKJ4 435 aa21.53■■□□□ 1.04
TRIM54-202ENST00000380075 MRPL43Q8N983 215 aaKnown RBP21.53■■□□□ 1.04
TRIM54-202ENST00000380075 KYQ8NBH2 561 aa21.53■■□□□ 1.04
TRIM54-202ENST00000380075 ANKRD49Q8WVL7 239 aa21.53■■□□□ 1.04
TRIM54-202ENST00000380075 TRMT2BQ96GJ1 504 aaKnown RBP21.53■■□□□ 1.04
TRIM54-202ENST00000380075 PRICKLE1Q96MT3 831 aaPredicted RBP21.53■■□□□ 1.04
TRIM54-202ENST00000380075 CDX2Q99626 313 aaPredicted RBP21.53■■□□□ 1.04
TRIM54-202ENST00000380075 SHCBP1LQ9BZQ2 653 aa21.53■■□□□ 1.04
TRIM54-202ENST00000380075 CYP4F11Q9HBI6 524 aa21.53■■□□□ 1.04
TRIM54-202ENST00000380075 ACSS2Q9NR19 701 aa21.53■■□□□ 1.04
TRIM54-202ENST00000380075 VPS28Q9UK41 221 aa21.53■■□□□ 1.04
TRIM54-202ENST00000380075 REV3LO60673 3130 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 NEMP2A6NFY4 417 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 OR51F1A6NGY5 319 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 SDHDO14521 159 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 STC2O76061 302 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 RPL17P18621 184 aaKnown RBP21.52■■□□□ 1.04
TRIM54-202ENST00000380075 CR2P20023 1033 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 CORO1AP31146 461 aaKnown RBP21.52■■□□□ 1.04
TRIM54-202ENST00000380075 STC1P52823 247 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 EPHB1P54762 984 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 SULT2A1Q06520 285 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 ADGRF1Q5T601 910 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 ZNF783Q6ZMS7 281 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 SNX32Q86XE0 403 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 ZNF461Q8TAF7 563 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 GUCD1Q96NT3 240 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 ASB2Q96Q27 587 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 SPON2Q9BUD6 331 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 OSBPL1AQ9BXW6 950 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 S100A14Q9HCY8 104 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 TBC1D30Q9Y2I9 924 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 LRCH1Q9Y2L9 728 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 CCL22O00626 93 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 SMIM24O75264 130 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 GJB3O75712 270 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 ABLIM3O94929 683 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 IGFBP4P22692 258 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 RPS24P62847 133 aaKnown RBP21.52■■□□□ 1.04
TRIM54-202ENST00000380075 TAF1AQ15573 450 aaPredicted RBP21.52■■□□□ 1.04
TRIM54-202ENST00000380075 GPR158Q5T848 1215 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 AFTPHQ6ULP2 937 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 ISCA2Q86U28 154 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 CDKN2AIPNLQ96HQ2 116 aa21.52■■□□□ 1.04
TRIM54-202ENST00000380075 TCF12Q99081 682 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms