RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 HCFC1R1Q9NWW0 138 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 AGO1Q9UL18 857 aaKnown RBP10.83□□□□□ -0.68
NEDD9-201ENST00000379433 ACOT9Q9Y305 439 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 CPQQ9Y646 472 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 POM121CA8CG34 1229 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 RASSF9O75901 435 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 PROCP04070 461 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 SERPINF2P08697 491 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 PAMP19021 973 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 SERPINB5P36952 375 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 SEPHS1P49903 392 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 SERINC3Q13530 473 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 EIF4EBP2Q13542 120 aaPredicted RBP10.83□□□□□ -0.68
NEDD9-201ENST00000379433 CAMK2BQ13554 666 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 MAJINQ3KP22 176 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 MBLAC2Q68D91 279 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 RANBP10Q6VN20 620 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 DCBLD1Q8N8Z6 715 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 TNKS2Q9H2K2 1166 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 CWH43Q9H720 699 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 SSU72Q9NP77 194 aaKnown RBP10.83□□□□□ -0.68
NEDD9-201ENST00000379433 OLA1Q9NTK5 396 aaKnown RBP10.83□□□□□ -0.68
NEDD9-201ENST00000379433 THAP1Q9NVV9 213 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 TMEM248Q9NWD8 314 aa10.83□□□□□ -0.68
NEDD9-201ENST00000379433 ATP6AP2A0A1C7CYW4 349 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 PIP5K1CO60331 668 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 RFPL2O75678 378 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 ATP6AP2O75787 350 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 ATP6V1G2O95670 118 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 GSTA2P09210 222 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 MSX2P35548 267 aaPredicted RBP10.82□□□□□ -0.68
NEDD9-201ENST00000379433 ATP6V1E1P36543 226 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 MAGEA11P43364 429 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 GRIA4P48058 902 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 CDH13P55290 713 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 CDK18Q07002 472 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 CBX2Q14781 532 aaPredicted RBP10.82□□□□□ -0.68
NEDD9-201ENST00000379433 CCDC6Q16204 474 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 GALNTL6Q49A17 601 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 HSF5Q4G112 596 aaPredicted RBP10.82□□□□□ -0.68
NEDD9-201ENST00000379433 GPR158Q5T848 1215 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 PLPP4Q5VZY2 271 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 TMEM198Q66K66 360 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 CDC26Q8NHZ8 85 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 PIWIL2Q8TC59 973 aaKnown RBP10.82□□□□□ -0.68
NEDD9-201ENST00000379433 AGAP11Q8TF27 550 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 ESAMQ96AP7 390 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 PRICKLE1Q96MT3 831 aaPredicted RBP10.82□□□□□ -0.68
NEDD9-201ENST00000379433 TSGA13Q96PP4 275 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 NUDCD1Q96RS6 583 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 THTPAQ9BU02 230 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 UBE2OQ9C0C9 1292 aaKnown RBP10.82□□□□□ -0.68
NEDD9-201ENST00000379433 ALG9Q9H6U8 611 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 ZNF334Q9HCZ1 680 aaPredicted RBP10.82□□□□□ -0.68
NEDD9-201ENST00000379433 ATAD3AQ9NVI7 634 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 FKBP14Q9NWM8 211 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 SIRPGQ9P1W8 387 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 UBA2Q9UBT2 640 aaPredicted RBP10.82□□□□□ -0.68
NEDD9-201ENST00000379433 ITGB1BP2Q9UKP3 347 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 APOBEC2Q9Y235 224 aaKnown RBP10.82□□□□□ -0.68
NEDD9-201ENST00000379433 PCDHB9Q9Y5E1 797 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 INPPL1O15357 1258 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 CLASP2O75122 1294 aaKnown RBP10.82□□□□□ -0.68
NEDD9-201ENST00000379433 SMIM24O75264 130 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 CLTBP09497 229 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 ALAS2P22557 587 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 ZXDBP98169 803 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 OCRLQ01968 901 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 LAPTM5Q13571 262 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 KYAT3Q6YP21 454 aaKnown RBP10.82□□□□□ -0.68
NEDD9-201ENST00000379433 TAS2R42Q7RTR8 314 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 UMODL1-AS1Q8N2C9 162 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 OR4K2Q8NGD2 314 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 SHKBP1Q8TBC3 707 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 WFDC5Q8TCV5 224 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 UTP4Q969X6 686 aaKnown RBP10.82□□□□□ -0.68
NEDD9-201ENST00000379433 RBM18Q96H35 190 aaKnown RBP10.82□□□□□ -0.68
NEDD9-201ENST00000379433 FAM161BQ96MY7 647 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 OLFM1Q99784 485 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 GATA5Q9BWX5 397 aaPredicted RBP10.82□□□□□ -0.68
NEDD9-201ENST00000379433 NDEL1Q9GZM8 345 aa10.82□□□□□ -0.68
NEDD9-201ENST00000379433 ELAC1Q9H777 363 aaKnown RBP10.82□□□□□ -0.68
NEDD9-201ENST00000379433 MRPL17Q9NRX2 175 aaKnown RBP10.82□□□□□ -0.68
NEDD9-201ENST00000379433 MAGEB16A2A368 324 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 DNAJC8O75937 253 aaPredicted RBP10.81□□□□□ -0.68
NEDD9-201ENST00000379433 PIGNO95427 931 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 PEX11BO96011 259 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 GSRP00390 522 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 SLC35E2BP0CK96 405 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 HMGA1P17096 107 aaKnown RBP10.81□□□□□ -0.68
NEDD9-201ENST00000379433 FMO4P31512 558 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 HNF1BP35680 557 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 SLC18A1P54219 525 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 SLC25A3Q00325 362 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 RNF148Q8N7C7 305 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 HEXDCQ8WVB3 486 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 APBB2Q92870 758 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 TMA16Q96EY4 203 aaKnown RBP10.81□□□□□ -0.68
NEDD9-201ENST00000379433 IMP4Q96G21 291 aaKnown RBP10.81□□□□□ -0.68
NEDD9-201ENST00000379433 ABHD8Q96I13 439 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms