RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 COQ10AQ96MF6 247 aa17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 NSMCE3Q96MG7 304 aa17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 PCMTD1Q96MG8 357 aaPredicted RBP17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 GPN2Q9H9Y4 310 aaPredicted RBP17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 DACH1Q9UI36 760 aa17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 PCDHGA3Q9Y5H0 932 aa17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 ST14Q9Y5Y6 855 aa17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 LRRK2Q5S007 2527 aa17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 IGHV1OR21-1A0A087WYE8 117 aa17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 TRAFD1O14545 582 aaPredicted RBP17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 CPP00450 1065 aa17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 DESP17661 470 aa17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 ADCY8P40145 1251 aa17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 CASRP41180 1078 aa17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 FOXK1P85037 733 aa17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 OGDHQ02218 1023 aa17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 TRA2AQ13595 282 aaKnown RBP eCLIP17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 NR1D2Q14995 579 aa17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 NCAPHQ15003 741 aa17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 DCAF12Q5T6F0 453 aa17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 MARK2Q7KZI7 788 aaKnown RBP17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 C17orf82Q86X59 251 aaPredicted RBP17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 KIAA1143Q96AT1 154 aaPredicted RBP17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 CNPY3Q9BT09 278 aa17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 DDA1Q9BW61 102 aa17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 FRMD8Q9BZ67 464 aaPredicted RBP17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 CDH19Q9H159 772 aa17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 TRNAU1APQ9NX07 287 aaKnown RBP17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 DONSONQ9NYP3 566 aa17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 PCSK1NQ9UHG2 260 aa17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 CD84Q9UIB8 345 aa17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 PCDHGC4Q9Y5F7 938 aa17.75■□□□□ 0.43
PDLIM4-202ENST00000379018 NTRK1P04629 796 aa17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 GP1BBP13224 206 aa17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 ERCC5P28715 1186 aaPredicted RBP17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 VIPR1P32241 457 aa17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 GPR3P46089 330 aa17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 AIF1P55008 147 aa17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 ZNF235Q14590 738 aa17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 PTPRRQ15256 657 aa17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 CLPPQ16740 277 aaPredicted RBP17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 DEFB109BQ30KR1 87 aa17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 PPP6R3Q5H9R7 873 aaPredicted RBP17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 FKBP15Q5T1M5 1219 aa17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 C16orf46Q6P387 395 aa17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 KDELC2Q7Z4H8 507 aa17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 HSD11B1LQ7Z5J1 315 aa17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 TRIM74Q86UV6 250 aa17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 TP53INP2Q8IXH6 220 aa17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 NPWQ8N729 165 aa17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 KCTD15Q96SI1 283 aaPredicted RBP17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 TEX101Q9BY14 249 aa17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 ASPSCR1Q9BZE9 553 aa17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 PLAAQ9Y263 795 aa17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 TMEM98Q9Y2Y6 226 aa17.74■□□□□ 0.43
PDLIM4-202ENST00000379018 A0A0U1RQS6 177 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 HEXIM1O94992 359 aaKnown RBP17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 TPM2P07951 284 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 ERCC2P18074 760 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 CR2P20023 1033 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 PSMA2P25787 234 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 EEF1GP26641 437 aaKnown RBP17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 MAPK9P45984 424 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 AP1S1P61966 158 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 CDC20Q12834 499 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 LBRQ14739 615 aaKnown RBP17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 ATP1A1-AS1Q5TC04 95 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 RFX8Q6ZV50 586 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 Q6ZVL8 140 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 ARHGAP12Q8IWW6 846 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 NLGN4XQ8N0W4 816 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 NLGN4YQ8NFZ3 816 aaPredicted RBP17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 DTD2Q96FN9 168 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 CATSPER2Q96P56 530 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 OR2M4Q96R27 311 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 SLC38A3Q99624 504 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 SNRNP25Q9BV90 132 aaKnown RBP17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 CLSTN2Q9H4D0 955 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 KLHL3Q9UH77 587 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 TUBD1Q9UJT1 453 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 ANAPC2Q9UJX6 822 aa17.73■□□□□ 0.43
PDLIM4-202ENST00000379018 LOC101059948A0A1B0GTJ6 334 aa17.72■□□□□ 0.43
PDLIM4-202ENST00000379018 TCRBV5S1A1TA0A578 114 aa17.72■□□□□ 0.43
PDLIM4-202ENST00000379018 ATMINO43313 823 aaPredicted RBP17.72■□□□□ 0.43
PDLIM4-202ENST00000379018 CYP2A6P11509 494 aaPredicted RBP17.72■□□□□ 0.43
PDLIM4-202ENST00000379018 CTPS1P17812 591 aa17.72■□□□□ 0.43
PDLIM4-202ENST00000379018 TNFAIP3P21580 790 aa17.72■□□□□ 0.43
PDLIM4-202ENST00000379018 LHCGRP22888 699 aa17.72■□□□□ 0.43
PDLIM4-202ENST00000379018 HTR7P34969 479 aa17.72■□□□□ 0.43
PDLIM4-202ENST00000379018 GPR1P46091 355 aa17.72■□□□□ 0.43
PDLIM4-202ENST00000379018 RENBPP51606 427 aa17.72■□□□□ 0.43
PDLIM4-202ENST00000379018 RAB15P59190 212 aa17.72■□□□□ 0.43
PDLIM4-202ENST00000379018 IL10RBQ08334 325 aa17.72■□□□□ 0.43
PDLIM4-202ENST00000379018 SLC10A7Q0GE19 358 aa17.72■□□□□ 0.43
PDLIM4-202ENST00000379018 KRT31Q15323 416 aa17.72■□□□□ 0.43
PDLIM4-202ENST00000379018 TMCO4Q5TGY1 634 aa17.72■□□□□ 0.43
PDLIM4-202ENST00000379018 TSPAN33Q86UF1 283 aa17.72■□□□□ 0.43
PDLIM4-202ENST00000379018 OR10G6Q8NH81 332 aa17.72■□□□□ 0.43
PDLIM4-202ENST00000379018 SLC45A3Q96JT2 553 aa17.72■□□□□ 0.43
PDLIM4-202ENST00000379018 PEBP4Q96S96 227 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms