RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 SUPT20HL2P0C7V6 817 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 SPANXN3Q5MJ09 141 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 RAB12Q6IQ22 244 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 FBXO16Q8IX29 292 aaPredicted RBP13.28□□□□□ -0.28
HIPK3-202ENST00000379016 SMG7Q92540 1137 aaKnown RBP13.28□□□□□ -0.28
HIPK3-202ENST00000379016 AP2M1Q96CW1 435 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 ERMAPQ96PL5 475 aaPredicted RBP13.28□□□□□ -0.28
HIPK3-202ENST00000379016 C3orf14Q9HBI5 128 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 POU2F3Q9UKI9 436 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 FBXL3Q9UKT7 428 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 GRIN2DO15399 1336 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 COL15A1P39059 1388 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 KANTRA0A1W2PQU2 76 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 J3QRK9 145 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 SLC26A4O43511 780 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 CFL1P23528 166 aaKnown RBP13.28□□□□□ -0.28
HIPK3-202ENST00000379016 EIF1AXP47813 144 aaKnown RBP13.28□□□□□ -0.28
HIPK3-202ENST00000379016 ADAM17P78536 824 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 EEF1A2Q05639 463 aaKnown RBP13.28□□□□□ -0.28
HIPK3-202ENST00000379016 GRIK2Q13002 908 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 GIT2Q14161 759 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 LSM12Q3MHD2 195 aaKnown RBP13.28□□□□□ -0.28
HIPK3-202ENST00000379016 ZDHHC20Q5W0Z9 365 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 CEP97Q8IW35 865 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 KCNS2Q9ULS6 477 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 MYOM2P54296 1465 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 C13orf42A0A1B0GVH6 325 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 TBL1XO60907 577 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 VDRP11473 427 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 DDX6P26196 483 aaKnown RBP eCLIP13.28□□□□□ -0.28
HIPK3-202ENST00000379016 SLC9B1Q4ZJI4 515 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 ATAD3CQ5T2N8 411 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 TAS1R3Q7RTX0 852 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 DIRAS2Q96HU8 199 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 ISCUQ9H1K1 167 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 MRPS23Q9Y3D9 190 aaKnown RBP13.28□□□□□ -0.28
HIPK3-202ENST00000379016 MAGEB16A2A368 324 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 C19orf81C9J6K1 198 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 TBX1O43435 398 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 ZMPSTE24O75844 475 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 PTPN4P29074 926 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 SLC16A9Q7RTY1 509 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 CPNE1Q99829 537 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 ASPNQ9BXN1 380 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 UCK2Q9BZX2 261 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 OR51V1Q9H2C8 321 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 ABCD2Q9UBJ2 740 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 ABCG2Q9UNQ0 655 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 HEG1Q9ULI3 1381 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 NUP160Q12769 1436 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 RFXANKO14593 260 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 SLC25A27O95847 323 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 CBX2Q14781 532 aaPredicted RBP13.27□□□□□ -0.28
HIPK3-202ENST00000379016 NR1I3Q14994 352 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 C1orf94Q6P1W5 598 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 NAT9Q9BTE0 207 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 ANKZF1Q9H8Y5 726 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 TMEM27Q9HBJ8 222 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 VNN3Q9NY84 501 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 MED11Q9P086 117 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 EMC3Q9P0I2 261 aa13.27□□□□□ -0.28
HIPK3-202ENST00000379016 DHX15O43143 795 aaKnown RBP13.27□□□□□ -0.29
HIPK3-202ENST00000379016 SNAP91O60641 907 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 CTPS1P17812 591 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 MMP13P45452 471 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 CCZ1BP86790 482 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 CCZ1P86791 482 aaPredicted RBP13.27□□□□□ -0.29
HIPK3-202ENST00000379016 TLE2Q04725 743 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 HECTD3Q5T447 861 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 SLC8B1Q6J4K2 584 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 ZNF782Q6ZMW2 699 aaPredicted RBP13.27□□□□□ -0.29
HIPK3-202ENST00000379016 TEFMQ96QE5 360 aaKnown RBP13.27□□□□□ -0.29
HIPK3-202ENST00000379016 LPIN3Q9BQK8 851 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 AARSD1Q9BTE6 412 aaKnown RBP13.27□□□□□ -0.29
HIPK3-202ENST00000379016 SIRPGQ9P1W8 387 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 PADI2Q9Y2J8 665 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 MTF2Q9Y483 593 aaPredicted RBP13.27□□□□□ -0.29
HIPK3-202ENST00000379016 TSPOAP1O95153 1857 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 RIIAD1A6NNX1 92 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 COL6A1P12109 1028 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 PVALBP20472 110 aaPredicted RBP13.27□□□□□ -0.29
HIPK3-202ENST00000379016 RYKP34925 604 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 SLC20A2Q08357 652 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 PCSK9Q8NBP7 692 aaKnown RBP13.27□□□□□ -0.29
HIPK3-202ENST00000379016 DPF1Q92782 380 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 CLPTM1LQ96KA5 538 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 BTBD10Q9BSF8 475 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 TUBG2Q9NRH3 451 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 KAT7O95251 611 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 ATP6V1G2O95670 118 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 YBX3P16989 372 aaKnown RBP eCLIP13.27□□□□□ -0.294e-7■□□□□ 11
HIPK3-202ENST00000379016 ZNF12P17014 697 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 ABCG1P45844 678 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 IRAK1P51617 712 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 TTI2Q6NXR4 508 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 XKRXQ6PP77 449 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 DPY19L4Q7Z388 723 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 RASGEF1CQ8N431 466 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 SEC14L3Q9UDX4 400 aa13.27□□□□□ -0.29
HIPK3-202ENST00000379016 MALT1Q9UDY8 824 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms