RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 ADAMDEC1O15204 470 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 PAK4O96013 591 aaPredicted RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 MATN1P21941 496 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 PRDX6P30041 224 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 PCDH1Q08174 1060 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 MILR1Q7Z6M3 343 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 FAM13CQ8NE31 585 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 BTF3L4Q96K17 158 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 TREX2Q9BQ50 279 aaPredicted RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 SLC39A8Q9C0K1 460 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.74□□□□□ -1.01
LIG3-202ENST00000378526 PPIEQ9UNP9 301 aaKnown RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 TTC3P53804 2025 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 TRAPPC13A5PLN9 417 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 ENTPD6O75354 484 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 RHOBTB3O94955 611 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 SNAPINO95295 136 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 CYB5AP00167 134 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 ABHD2P08910 425 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 GZMAP12544 262 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 BMP3P12645 472 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 ADORA2BP29275 332 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 HOXD12P35452 270 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 OR3A3P47888 321 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 OR3A2P47893 321 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 LIMK2P53671 638 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 UAP1L1Q3KQV9 507 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 ARHGAP12Q8IWW6 846 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 CERS2Q96G23 380 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 CENPNQ96H22 339 aaPredicted RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 CDADC1Q9BWV3 514 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 IL1RAPQ9NPH3 570 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 BRD7Q9NPI1 651 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 SCUBE2Q9NQ36 999 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 GPATCH2Q9NW75 528 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 HCN3Q9P1Z3 774 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 CCDC85CA6NKD9 419 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 LATS1O95835 1130 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 UQCRC1P31930 480 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 ACVR2BQ13705 512 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 FSCN1Q16658 493 aaKnown RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 ARL11Q969Q4 196 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 ZNF354BQ96LW1 612 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 MCCC1Q96RQ3 725 aaPredicted RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 C12orf65Q9H3J6 166 aaKnown RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 WDR6Q9NNW5 1121 aaKnown RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 MYNNQ9NPC7 610 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 TLR6Q9Y2C9 796 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 PCDHGB1Q9Y5G3 927 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 PCDHA3Q9Y5H8 950 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 ANKRD33BA6NCL7 494 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 MBP02144 154 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 COX7A2P14406 83 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 AMPD1P23109 780 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 AZGP1P25311 298 aaKnown RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 KLHL26Q53HC5 615 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 CENPSQ8N2Z9 138 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 ZNF433Q8N7K0 673 aaPredicted RBP8.74□□□□□ -1.01
LIG3-202ENST00000378526 STK35Q8TDR2 534 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 MTMR8Q96EF0 704 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 KLHL15Q96M94 604 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 COG8Q96MW5 612 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 FCRL4Q96PJ5 515 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 PHOX2BQ99453 314 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 LGR4Q9BXB1 951 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 REEP4Q9H6H4 257 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 TLL2Q9Y6L7 1015 aa8.74□□□□□ -1.01
LIG3-202ENST00000378526 TRIP11Q15643 1979 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 AGAP5A6NIR3 686 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 DRD4P21917 467 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 RPA3P35244 121 aaPredicted RBP8.73□□□□□ -1.01
LIG3-202ENST00000378526 TAGLNQ01995 201 aaKnown RBP8.73□□□□□ -1.01
LIG3-202ENST00000378526 CSHL1Q14406 222 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 ZNF460Q14592 562 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 KCTD19Q17RG1 926 aaPredicted RBP8.73□□□□□ -1.01
LIG3-202ENST00000378526 EXOC3L2Q2M3D2 409 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 IL27RAQ6UWB1 636 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 GCNT7Q6ZNI0 430 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 COMMD7Q86VX2 200 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 KCNMB4Q86W47 210 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 C7orf61Q8IZ16 206 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 STK40Q8N2I9 435 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 MAELQ96JY0 434 aaKnown RBP8.73□□□□□ -1.01
LIG3-202ENST00000378526 TMEM68Q96MH6 324 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 FUNDC2Q9BWH2 189 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 ZNF175Q9Y473 711 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 PCDHGB7Q9Y5F8 929 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 ACOX3O15254 700 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 RFPL1O75677 317 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 PUM1Q14671 1186 aaKnown RBP eCLIP8.73□□□□□ -1.01
LIG3-202ENST00000378526 ZNF674Q2M3X9 581 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 FAM198BQ6UWH4 519 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 ZSWIM3Q96MP5 696 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 KCND1Q9NSA2 647 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 KCNH4Q9UQ05 1017 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 NUDT14O95848 222 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 PRR29P0C7W0 189 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 CYP3A5P20815 502 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 SLC12A3P55017 1021 aa8.73□□□□□ -1.01
LIG3-202ENST00000378526 RBP5P82980 135 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms