RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 SPEF2Q9C093 1822 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 NCANO14594 1321 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 MRC1P22897 1456 aa11.77□□□□□ -0.52
NPHP4-202ENST00000378161 DHRS12A0PJE2 317 aa11.77□□□□□ -0.52
NPHP4-202ENST00000378161 CETPP11597 493 aa11.77□□□□□ -0.52
NPHP4-202ENST00000378161 TIE1P35590 1138 aa11.77□□□□□ -0.52
NPHP4-202ENST00000378161 RPS9P46781 194 aaKnown RBP11.77□□□□□ -0.52
NPHP4-202ENST00000378161 HLCSP50747 726 aa11.77□□□□□ -0.52
NPHP4-202ENST00000378161 CDH6P55285 790 aa11.77□□□□□ -0.52
NPHP4-202ENST00000378161 CATSPER4Q7RTX7 472 aa11.77□□□□□ -0.52
NPHP4-202ENST00000378161 C7orf31Q8N865 590 aa11.77□□□□□ -0.52
NPHP4-202ENST00000378161 LPGAT1Q92604 370 aa11.77□□□□□ -0.52
NPHP4-202ENST00000378161 GMCL1Q96IK5 515 aa11.77□□□□□ -0.52
NPHP4-202ENST00000378161 HMX3A6NHT5 357 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.77□□□□□ -0.53
NPHP4-202ENST00000378161 SMCO1Q147U7 214 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 CYP51A1Q16850 503 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 UNC5DQ6UXZ4 953 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 WDR49Q8IV35 697 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 LNX2Q8N448 690 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.77□□□□□ -0.53
NPHP4-202ENST00000378161 LENG8Q96PV6 779 aaPredicted RBP11.77□□□□□ -0.53
NPHP4-202ENST00000378161 GAD1Q99259 594 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 CCDC106Q9BWC9 280 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 MRPL4Q9BYD3 311 aaKnown RBP11.77□□□□□ -0.53
NPHP4-202ENST00000378161 MMP27Q9H306 513 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 DHX33Q9H6R0 707 aaKnown RBP11.77□□□□□ -0.53
NPHP4-202ENST00000378161 ZNF556Q9HAH1 456 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 PDE10AQ9Y233 779 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 PCDHGB3Q9Y5G1 929 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 F8W036 122 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 PAPSS1O43252 624 aaPredicted RBP11.77□□□□□ -0.53
NPHP4-202ENST00000378161 BCAS1O75363 584 aaPredicted RBP11.77□□□□□ -0.53
NPHP4-202ENST00000378161 DNAJB2P25686 324 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 PDHA2P29803 388 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 SLC7A1P30825 629 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 SDC4P31431 198 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 RPL9P32969 192 aaKnown RBP11.77□□□□□ -0.53
NPHP4-202ENST00000378161 GPLD1P80108 840 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 POU5F1BQ06416 359 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 FSTL1Q12841 308 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 XKR3Q5GH77 459 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 GLRA4Q5JXX5 417 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 FAXCQ5TGI0 409 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 TMEM236Q5W0B7 351 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 ANKS6Q68DC2 871 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 CBWD2Q8IUF1 395 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 SLC37A3Q8NCC5 494 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 ST8SIA4Q92187 359 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 FRMD6Q96NE9 622 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 DSN1Q9H410 356 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 ZNF408Q9H9D4 720 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 GPN2Q9H9Y4 310 aaPredicted RBP11.77□□□□□ -0.53
NPHP4-202ENST00000378161 CYP3A43Q9HB55 503 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 TBX20Q9UMR3 447 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 VPS9D1Q9Y2B5 631 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 SYNJ2BP-COX16A0A087WUM0 186 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 WTIPA6NIX2 430 aaPredicted RBP11.77□□□□□ -0.53
NPHP4-202ENST00000378161 BET1O15155 118 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 SHOXO15266 292 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 WDPCPO95876 746 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 CLEC2LP0C7M8 214 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 NPY2RP49146 381 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 HSD17B7P56937 341 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 GABPAQ06546 454 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 BMPR2Q13873 1038 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 NFYCQ13952 458 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 CAMK1Q14012 370 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 CRTC1Q6UUV9 634 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 STRA8Q7Z7C7 330 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 UBR7Q8N806 425 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 SETD9Q8NE22 299 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 MCEEQ96PE7 176 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 ZNF302Q9NR11 478 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 COX16Q9P0S2 106 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 UBQLN2Q9UHD9 624 aa11.77□□□□□ -0.53
NPHP4-202ENST00000378161 FAM240BA0A1B0GVZ2 78 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 HOXA2O43364 376 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 FAM189A1O60320 539 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 FAM20BO75063 409 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 KDM4BO94953 1096 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 RPS17P08708 135 aaKnown RBP11.76□□□□□ -0.53
NPHP4-202ENST00000378161 CYP2C18P33260 490 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 ATXN1P54253 815 aaKnown RBP11.76□□□□□ -0.53
NPHP4-202ENST00000378161 FAM102AQ5T9C2 384 aaPredicted RBP11.76□□□□□ -0.53
NPHP4-202ENST00000378161 FAM92BQ6ZTR7 304 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 TTC16Q8NEE8 873 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 ART5Q96L15 291 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 ZNF578Q96N58 590 aaPredicted RBP11.76□□□□□ -0.53
NPHP4-202ENST00000378161 PI4K2AQ9BTU6 479 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 CHST12Q9NRB3 414 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 IGSF9BQ9UPX0 1349 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 AGRPO00253 132 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 TYROBPO43914 113 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 NRP2O60462 931 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 PROSCO94903 275 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 MBL2P11226 248 aaPredicted RBP11.76□□□□□ -0.53
NPHP4-202ENST00000378161 CYP2A7P20853 494 aa11.76□□□□□ -0.53
NPHP4-202ENST00000378161 PSMD4P55036 377 aaKnown RBP11.76□□□□□ -0.53
NPHP4-202ENST00000378161 EFHC2Q5JST6 749 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms