RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 PTK2BQ14289 1009 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 HLA-BQ31612 363 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 TTC27Q6P3X3 843 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 Q6ZVL8 140 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 LYSMD3Q7Z3D4 306 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 PDCD7Q8N8D1 485 aaKnown RBP13.23□□□□□ -0.29
CKAP2-202ENST00000378034 OR13H1Q8NG92 308 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 NETO1Q8TDF5 533 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 CAPZA3Q96KX2 299 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 RUNDC3BQ96NL0 473 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 GTPBP2Q9BX10 602 aaKnown RBP13.23□□□□□ -0.29
CKAP2-202ENST00000378034 GPR63Q9BZJ6 419 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 RAB6BQ9NRW1 208 aa13.23□□□□□ -0.29
CKAP2-202ENST00000378034 DNAAF2Q9NVR5 837 aaKnown RBP13.23□□□□□ -0.29
CKAP2-202ENST00000378034 E7EVH7 732 aa13.22□□□□□ -0.29
CKAP2-202ENST00000378034 CCDC188H7C350 402 aa13.22□□□□□ -0.29
CKAP2-202ENST00000378034 KIF2AO00139 706 aaPredicted RBP13.22□□□□□ -0.29
CKAP2-202ENST00000378034 CDX4O14627 284 aaPredicted RBP13.22□□□□□ -0.29
CKAP2-202ENST00000378034 YKT6O15498 198 aa13.22□□□□□ -0.29
CKAP2-202ENST00000378034 SUN1O94901 812 aa13.22□□□□□ -0.29
CKAP2-202ENST00000378034 HMGCLP35914 325 aa13.22□□□□□ -0.29
CKAP2-202ENST00000378034 TRIM23P36406 574 aa13.22□□□□□ -0.29
CKAP2-202ENST00000378034 CHRNA4P43681 627 aa13.22□□□□□ -0.29
CKAP2-202ENST00000378034 SPINT3P49223 89 aa13.22□□□□□ -0.29
CKAP2-202ENST00000378034 INPP5AQ14642 412 aa13.22□□□□□ -0.29
CKAP2-202ENST00000378034 PNCKQ6P2M8 343 aa13.22□□□□□ -0.29
CKAP2-202ENST00000378034 LAYNQ6UX15 382 aa13.22□□□□□ -0.29
CKAP2-202ENST00000378034 MINDY1Q8N5J2 469 aa13.22□□□□□ -0.29
CKAP2-202ENST00000378034 GLIS1Q8NBF1 620 aa13.22□□□□□ -0.29
CKAP2-202ENST00000378034 GAREM1Q9H706 876 aa13.22□□□□□ -0.29
CKAP2-202ENST00000378034 FSCN3Q9NQT6 498 aa13.22□□□□□ -0.29
CKAP2-202ENST00000378034 EIF2B3Q9NR50 452 aaKnown RBP13.22□□□□□ -0.29
CKAP2-202ENST00000378034 NFKBIL1Q9UBC1 381 aaPredicted RBP13.22□□□□□ -0.29
CKAP2-202ENST00000378034 SPO11Q9Y5K1 396 aa13.22□□□□□ -0.29
CKAP2-202ENST00000378034 GVINP1Q7Z2Y8 2422 aa13.22□□□□□ -0.29
CKAP2-202ENST00000378034 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.21□□□□□ -0.29
CKAP2-202ENST00000378034 SPTY2D1-AS1A0A0U1RR47 76 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 PPFIA2O75334 1257 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 GAS8O95995 478 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 PCCBP05166 539 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 PIRTP0C851 137 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 ZSCAN5DPP0CG00 497 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 LMAN1P49257 510 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 THOP1P52888 689 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 DCDC1P59894 354 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 PDE1BQ01064 536 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 SLC14A1Q13336 389 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 FAXCQ5TGI0 409 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 STPG1Q5TH74 334 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 ZDHHC20Q5W0Z9 365 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 DENND5AQ6IQ26 1287 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 SPATS2Q86XZ4 545 aaKnown RBP13.21□□□□□ -0.29
CKAP2-202ENST00000378034 SLCO2A1Q92959 643 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 AP2M1Q96CW1 435 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 C16orf45Q96MC5 204 aaPredicted RBP13.21□□□□□ -0.29
CKAP2-202ENST00000378034 ELF4Q99607 663 aaPredicted RBP13.21□□□□□ -0.29
CKAP2-202ENST00000378034 C19orf43Q9BQ61 176 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 APOOQ9BUR5 198 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 ABCG8Q9H221 673 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 RXFP3Q9NSD7 469 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 PCYOX1Q9UHG3 505 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 SHOC2Q9UQ13 582 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 WDR87Q6ZQQ6 2873 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 A0A0U1RQS6 177 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.21□□□□□ -0.29
CKAP2-202ENST00000378034 PDE2AO00408 941 aaPredicted RBP13.21□□□□□ -0.29
CKAP2-202ENST00000378034 KRT14P02533 472 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 HTR1BP28222 390 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 RXRGP48443 463 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 ARRB1P49407 418 aaPredicted RBP13.21□□□□□ -0.29
CKAP2-202ENST00000378034 CDK16Q00536 496 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 PDE1CQ14123 709 aaPredicted RBP13.21□□□□□ -0.29
CKAP2-202ENST00000378034 SPARCL1Q14515 664 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 GLT6D1Q7Z4J2 308 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 PRUNE1Q86TP1 453 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 SLC22A18ASQ8N1D0 253 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 TTC30BQ8N4P2 665 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 DTX3LQ8TDB6 740 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 BRSK1Q8TDC3 778 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 BLOC1S5Q8TDH9 187 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 EID2BQ96D98 161 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 APOL2Q9BQE5 337 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 FAM83DQ9H4H8 585 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.21□□□□□ -0.292e-8■□□□□ 10.8
CKAP2-202ENST00000378034 PCDHGB2Q9Y5G2 931 aa13.21□□□□□ -0.29
CKAP2-202ENST00000378034 A0A1B0GTQ1 180 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 C2orf81A6NN90 581 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 AP3B1O00203 1094 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 CACNB4O00305 520 aaPredicted RBP13.2□□□□□ -0.3
CKAP2-202ENST00000378034 GDF9O60383 454 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 ECEL1O95672 775 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 CRTAMO95727 393 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 KELP23276 732 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 KIAA1024LP59773 190 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 MSLNQ13421 630 aaPredicted RBP13.2□□□□□ -0.3
CKAP2-202ENST00000378034 NFATC4Q14934 902 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 TAF1AQ15573 450 aaPredicted RBP13.2□□□□□ -0.3
CKAP2-202ENST00000378034 MACC1Q6ZN28 852 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 PLA2G15Q8NCC3 412 aa13.2□□□□□ -0.3
CKAP2-202ENST00000378034 PLEKHG4BQ96PX9 1271 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms