RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 MROH6A6NGR9 719 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 SLC7A4O43246 635 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 CD1DP15813 335 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 CTBSQ01459 385 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 CACNB2Q08289 660 aaPredicted RBP13.22□□□□□ -0.29
ACTN1-202ENST00000376839 DCTN2Q13561 401 aaKnown RBP13.22□□□□□ -0.29
ACTN1-202ENST00000376839 SIRPB2Q5JXA9 342 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 CD300LGQ6UXG3 332 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 ZNF786Q8N393 782 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 RPL10LQ96L21 214 aaKnown RBP13.22□□□□□ -0.29
ACTN1-202ENST00000376839 MUC3BQ9H195 1237 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 BTRCQ9Y297 605 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 SQORQ9Y6N5 450 aa13.22□□□□□ -0.29
ACTN1-202ENST00000376839 A0A1W2PQH9 124 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 H3BMM5 538 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 PAPSS2O95340 614 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-202ENST00000376839 ITGB1P05556 798 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 HTR7P34969 479 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 APLP1P51693 650 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 TUBA4AP68366 448 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 NFKB2Q00653 900 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 LPIN1Q14693 890 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 PFKFB4Q16877 469 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 FBXO48Q5FWF7 155 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 BEND5Q7L4P6 421 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 DDIASQ8IXT1 998 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 HM13Q8TCT9 377 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 TBATAQ96M53 351 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 VPS45Q9NRW7 570 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 EBF1Q9UH73 591 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 SLC8A2Q9UPR5 921 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 BBIP1A8MTZ0 92 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 TNFRSF10BO14763 440 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 LDB2O43679 373 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 CNTN5O94779 1100 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 CLIC3O95833 236 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 MTHFD2P13995 350 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 RPL9P32969 192 aaKnown RBP13.21□□□□□ -0.29
ACTN1-202ENST00000376839 ETFBP38117 255 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 RENBPP51606 427 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 MLLT6P55198 1093 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-202ENST00000376839 MRPS6P82932 125 aaKnown RBP13.21□□□□□ -0.29
ACTN1-202ENST00000376839 SEMA3AQ14563 771 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 CCL14Q16627 93 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 ALFQ53S48 1182 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 IRAK1BP1Q5VVH5 260 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 METTL23Q86XA0 190 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 CMTR2Q8IYT2 770 aaKnown RBP13.21□□□□□ -0.29
ACTN1-202ENST00000376839 PSMG2Q969U7 264 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 ZUFSPQ96AP4 578 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 TRIM62Q9BVG3 475 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 AGO3Q9H9G7 860 aaKnown RBP13.21□□□□□ -0.29
ACTN1-202ENST00000376839 AGPAT4Q9NRZ5 378 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 RHBDL2Q9NX52 303 aa13.21□□□□□ -0.29
ACTN1-202ENST00000376839 UXTQ9UBK9 157 aaPredicted RBP13.21□□□□□ -0.29
ACTN1-202ENST00000376839 AZIN1O14977 448 aa13.21□□□□□ -0.3
ACTN1-202ENST00000376839 ANGPT2O15123 496 aa13.21□□□□□ -0.3
ACTN1-202ENST00000376839 SEC24DO94855 1032 aaPredicted RBP13.21□□□□□ -0.3
ACTN1-202ENST00000376839 BMP10O95393 424 aa13.21□□□□□ -0.3
ACTN1-202ENST00000376839 OR4Q2P0C623 313 aa13.21□□□□□ -0.3
ACTN1-202ENST00000376839 ATXN1LP0C7T5 689 aaKnown RBP13.21□□□□□ -0.3
ACTN1-202ENST00000376839 LINC00032P0C843 101 aa13.21□□□□□ -0.3
ACTN1-202ENST00000376839 FDXRP22570 491 aa13.21□□□□□ -0.3
ACTN1-202ENST00000376839 SLC6A2P23975 617 aa13.21□□□□□ -0.3
ACTN1-202ENST00000376839 SOX11P35716 441 aa13.21□□□□□ -0.3
ACTN1-202ENST00000376839 GRIK1P39086 918 aa13.21□□□□□ -0.3
ACTN1-202ENST00000376839 STT3AP46977 705 aa13.21□□□□□ -0.3
ACTN1-202ENST00000376839 ADARP55265 1226 aaKnown RBP13.21□□□□□ -0.3
ACTN1-202ENST00000376839 ATP6V0D1P61421 351 aa13.21□□□□□ -0.3
ACTN1-202ENST00000376839 MARC1Q5VT66 337 aa13.21□□□□□ -0.3
ACTN1-202ENST00000376839 SDHAF4Q5VUM1 108 aa13.21□□□□□ -0.3
ACTN1-202ENST00000376839 GALNT7Q86SF2 657 aa13.21□□□□□ -0.3
ACTN1-202ENST00000376839 MIER2Q8N344 545 aa13.21□□□□□ -0.3
ACTN1-202ENST00000376839 PGBD5Q8N414 524 aa13.21□□□□□ -0.3
ACTN1-202ENST00000376839 MFSD2AQ8NA29 543 aa13.21□□□□□ -0.3
ACTN1-202ENST00000376839 TRPC4APQ8TEL6 797 aa13.21□□□□□ -0.3
ACTN1-202ENST00000376839 ADI1Q9BV57 179 aa13.21□□□□□ -0.3
ACTN1-202ENST00000376839 LMCD1Q9NZU5 365 aa13.21□□□□□ -0.3
ACTN1-202ENST00000376839 ARPC2O15144 300 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 PRSS56P0CW18 603 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 MTHFD1P11586 935 aaKnown RBP13.2□□□□□ -0.3
ACTN1-202ENST00000376839 HOXC8P31273 242 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 CPT1AP50416 773 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 ECT2LQ008S8 904 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 OVOS1Q6IE37 1185 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 ZNF354CQ86Y25 554 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 CLVS1Q8IUQ0 354 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-202ENST00000376839 ADGRG5Q8IZF4 528 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 GABPB2Q8TAK5 448 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-202ENST00000376839 TUBGCP3Q96CW5 907 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 HOPXQ9BPY8 73 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-202ENST00000376839 HACD3Q9P035 362 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 POLG2Q9UHN1 485 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 OAZ3Q9UMX2 235 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 SLC45A1Q9Y2W3 748 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 NDUFAF1Q9Y375 327 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 ARL5AQ9Y689 179 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 PTPRDP23468 1912 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 AQP12BA6NM10 295 aa13.2□□□□□ -0.3
ACTN1-202ENST00000376839 TMX2-CTNND1H3BSU7 103 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms