RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 HPS4Q9NQG7 708 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 MARCH2Q9P0N8 246 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CDC14AQ9UNH5 594 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 COL24A1Q17RW2 1714 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 A0A1W2PPW3 197 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 H3BNX3 289 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 HS6ST1O60243 411 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CLASP2O75122 1294 aaKnown RBP14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 H6PDO95479 791 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GOT2P00505 430 aaKnown RBP14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ASLP04424 464 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 MAGEA3P43357 314 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 FAM171A1Q5VUB5 890 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CHSY3Q70JA7 882 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 OR2T34Q8NGX1 318 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 OR2T3Q8NH03 318 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 SPPL2BQ8TCT7 592 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GPR21Q99679 349 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PNPLA3Q9NST1 481 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GMIPQ9P107 970 aa14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PNMA8BQ9ULN7 279 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF1B-201ENST00000376259 A0A087WXM4 84 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 I6L893 689 aaPredicted RBP14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 BCAS2O75934 225 aaPredicted RBP14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PIGFQ07326 219 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 BNIP3Q12983 259 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 IQSEC1Q6DN90 963 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PAQR3Q6TCH7 311 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 BNIPLQ7Z465 357 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 C2orf69Q8N8R5 385 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ABCC13Q9NSE7 274 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CATSPERZQ9NTU4 200 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 MKS1Q9NXB0 559 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GALPQ9UBC7 116 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CDH9Q9ULB4 789 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 MCM3APO60318 1980 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PTGESO14684 152 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 NOBOXO60393 691 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CNPP09543 421 aaKnown RBP14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GLDCP23378 1020 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ACVRL1P37023 503 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 AGTR2P50052 363 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 DGKQP52824 942 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 FOXA1P55317 472 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 LAPTM5Q13571 262 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 LAPTM4AQ15012 233 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ALFQ53S48 1182 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 TMEM26Q6ZUK4 368 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PAQR9Q6ZVX9 377 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 TMCO5AQ8N6Q1 288 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 DDHD1Q8NEL9 900 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PARK7Q99497 189 aaKnown RBP14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PRKD2Q9BZL6 878 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CXorf21Q9HAI6 301 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ZFYVE28Q9HCC9 887 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 WDR6Q9NNW5 1121 aaKnown RBP14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 TAS2R13Q9NYV9 303 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ANAPC2Q9UJX6 822 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 C7orf72A4D263 438 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 LRATO95237 230 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CLCN5P51795 746 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 IL5RAQ01344 420 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 OCA2Q04671 838 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 LIPEQ05469 1076 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 VAC14Q08AM6 782 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 LSAMPQ13449 338 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ARHGEF7Q14155 803 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GCNT7Q6ZNI0 430 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ZMIZ2Q8NF64 920 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 NUDT8Q8WV74 236 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ADI1Q9BV57 179 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 RERGLQ9H628 205 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 TMLHEQ9NVH6 421 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PTTG2Q9NZH5 202 aa14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 COL2A1P02458 1487 aaPredicted RBP14.37□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CCDC162PA2VCL2 907 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 SOCS2O14508 198 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 MATN3O15232 486 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 XIAPP98170 497 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GALNT2Q10471 571 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 TSTD2Q5T7W7 516 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 OGFRL1Q5TC84 451 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 RDH11Q8TC12 318 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CENPIQ92674 756 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ROGDIQ9GZN7 287 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 RUBCNLQ9H714 662 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ZNF229Q9UJW7 825 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CDC7O00311 574 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 B4GAT1O43505 415 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 OR4F21O95013 312 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ITGB1P05556 798 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 FYNP06241 537 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PRKCQQ04759 706 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 OGFOD2Q6N063 350 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GALNT5Q7Z7M9 940 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ZNF598Q86UK7 904 aaKnown RBP14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CCDC117Q8IWD4 279 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ITFG1Q8TB96 612 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ASB9Q96DX5 294 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 C3orf30Q96M34 536 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms