RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 ESAMQ96AP7 390 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 ZNF512Q96ME7 567 aaPredicted RBP13.14□□□□□ -0.31
CUL4A-203ENST00000375441 PPM1MQ96MI6 270 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 OSBPL6Q9BZF3 934 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 ALG2Q9H553 416 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 SMPD3Q9NY59 655 aaPredicted RBP13.14□□□□□ -0.31
CUL4A-203ENST00000375441 EIF3LQ9Y262 564 aaKnown RBP13.14□□□□□ -0.31
CUL4A-203ENST00000375441 TRPV2Q9Y5S1 764 aa13.14□□□□□ -0.31
CUL4A-203ENST00000375441 TPP2P29144 1249 aaPredicted RBP13.13□□□□□ -0.31
CUL4A-203ENST00000375441 RPS9P46781 194 aaKnown RBP13.13□□□□□ -0.31
CUL4A-203ENST00000375441 TMED10P49755 219 aaKnown RBP13.13□□□□□ -0.31
CUL4A-203ENST00000375441 PRKG2Q13237 762 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 DDR2Q16832 855 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 TIGD5Q53EQ6 642 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 ANGPTL8Q6UXH0 198 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 TBC1D21Q8IYX1 336 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 C2CD4AQ8NCU7 369 aaPredicted RBP13.13□□□□□ -0.31
CUL4A-203ENST00000375441 HM13Q8TCT9 377 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 IRGQQ8WZA9 623 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 EXOC2Q96KP1 924 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 ZNF195O14628 629 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 AURKAO14965 403 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 IRAK2O43187 625 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 RTL3Q8N8U3 475 aaKnown RBP13.13□□□□□ -0.31
CUL4A-203ENST00000375441 GPR152Q8TDT2 470 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 UPF1Q92900 1129 aaKnown RBP eCLIP13.13□□□□□ -0.31
CUL4A-203ENST00000375441 TMIGD2Q96BF3 282 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 HAPLN3Q96S86 360 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 TRIM8Q9BZR9 551 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 ZFYVE28Q9HCC9 887 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 ZNF229Q9UJW7 825 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 SLC7A4O43246 635 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 CNMDO75829 334 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 PARNO95453 639 aaKnown RBP13.13□□□□□ -0.31
CUL4A-203ENST00000375441 RPL9P32969 192 aaKnown RBP13.13□□□□□ -0.31
CUL4A-203ENST00000375441 NAA20P61599 178 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 CLCQ05315 142 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 KIAA1841Q6NSI8 718 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 RNF111Q6ZNA4 994 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 PSMG2Q969U7 264 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 HMCESQ96FZ2 354 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 HBEGFQ99075 208 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 SLC29A1Q99808 456 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 OSBPL2Q9H1P3 480 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 ADAMTS10Q9H324 1103 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 FBXO44Q9H4M3 255 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 WWOXQ9NZC7 414 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 MARCH2Q9P0N8 246 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 USP3Q9Y6I4 520 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 TAF1LQ8IZX4 1826 aa13.13□□□□□ -0.31
CUL4A-203ENST00000375441 CBX4O00257 560 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 HS6ST1O60243 411 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 GSRP00390 522 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 CCNA2P20248 432 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 YAP1P46937 504 aaKnown RBP13.12□□□□□ -0.31
CUL4A-203ENST00000375441 RGS4P49798 205 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 CDK9P50750 372 aaKnown RBP13.12□□□□□ -0.31
CUL4A-203ENST00000375441 OXCT1P55809 520 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 IL2P60568 153 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 C1QTNF8P60827 252 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 VAC14Q08AM6 782 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 NFE2Q16621 373 aaPredicted RBP13.12□□□□□ -0.31
CUL4A-203ENST00000375441 ERMP1Q7Z2K6 904 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 ZNF554Q86TJ5 538 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 ASPSCR1Q9BZE9 553 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 WDR6Q9NNW5 1121 aaKnown RBP13.12□□□□□ -0.31
CUL4A-203ENST00000375441 DOLKQ9UPQ8 538 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 PCDHGA7Q9Y5G6 932 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 QSER1Q2KHR3 1735 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 DNAJC25-GNG10A0A024R161 153 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 FKBP9O95302 570 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 GOT2P00505 430 aaKnown RBP13.12□□□□□ -0.31
CUL4A-203ENST00000375441 SERPINB10P48595 397 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 DNAJB13P59910 316 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 MRPS6P82932 125 aaKnown RBP13.12□□□□□ -0.31
CUL4A-203ENST00000375441 IL5RAQ01344 420 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 SLC10A7Q0GE19 358 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 TECRLQ5HYJ1 363 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 GLYATQ6IB77 296 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 CXCL17Q6UXB2 119 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 FKBP9P1Q75LS8 142 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 CLEC14AQ86T13 490 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 C8orf59Q8N0T1 100 aaPredicted RBP13.12□□□□□ -0.31
CUL4A-203ENST00000375441 RUBCNLQ9H714 662 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 SCUBE2Q9NQ36 999 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 KCTD3Q9Y597 815 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 AQP12BA6NM10 295 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 GPIP06744 558 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 CES1P23141 567 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 HERVK_113P63132 956 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 BROXQ5VW32 411 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 TMEM214Q6NUQ4 689 aaKnown RBP13.12□□□□□ -0.31
CUL4A-203ENST00000375441 AQP12AQ8IXF9 295 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 LGI2Q8N0V4 545 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 BPIFB6Q8NFQ5 453 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 ADAM2Q99965 735 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 ERVK-6Q9BXR3 956 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 DNAAF2Q9NVR5 837 aaKnown RBP13.12□□□□□ -0.31
CUL4A-203ENST00000375441 LRFN2Q9ULH4 789 aa13.12□□□□□ -0.31
CUL4A-203ENST00000375441 SNAI1O95863 264 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms