RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 CMTR2Q8IYT2 770 aaKnown RBP11.1□□□□□ -0.63
CCDC40-203ENST00000374877 PACRGLQ8N7B6 248 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 TBC1D15Q8TC07 691 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 EDEM1Q92611 657 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 FBXL8Q96CD0 374 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 WDR6Q9NNW5 1121 aaKnown RBP11.1□□□□□ -0.63
CCDC40-203ENST00000374877 RAD54BQ9Y620 910 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 ARVCFO00192 962 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 ANGPT2O15123 496 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 GPR182O15218 404 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 INPP4BO15327 924 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 MT-ND1P03886 318 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 FYNP06241 537 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 CHRM3P20309 590 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 FUT4P22083 530 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 EEF1B2P24534 225 aaKnown RBP11.1□□□□□ -0.63
CCDC40-203ENST00000374877 DNAJB1P25685 340 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 ARCN1P48444 511 aaKnown RBP11.1□□□□□ -0.63
CCDC40-203ENST00000374877 CDH13P55290 713 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 TRAF2Q12933 501 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 SEMA3BQ13214 749 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 TGFBIQ15582 683 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 SLC36A3Q495N2 470 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 ZNF789Q5FWF6 425 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 OSTM1Q86WC4 334 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 CNTN4Q8IWV2 1026 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 SEPT8Q92599 483 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 RNF34Q969K3 372 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 CCDC126Q96EE4 140 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 C3orf30Q96M34 536 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 SLC2A13Q96QE2 648 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 OLFM1Q99784 485 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 RHOBTB2Q9BYZ6 727 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 BRD8Q9H0E9 1235 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 ARMC7Q9H6L4 198 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 AGPAT4Q9NRZ5 378 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 DSEQ9UL01 958 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 CDH7Q9ULB5 785 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 UBQLN1Q9UMX0 589 aaKnown RBP11.1□□□□□ -0.63
CCDC40-203ENST00000374877 NOD1Q9Y239 953 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 AAR2Q9Y312 384 aaKnown RBP11.1□□□□□ -0.63
CCDC40-203ENST00000374877 PTGDR2Q9Y5Y4 395 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 V9GYQ6 96 aa11.1□□□□□ -0.63
CCDC40-203ENST00000374877 TRIM64CA6NLI5 447 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 ZNF189O75820 626 aaPredicted RBP11.09□□□□□ -0.63
CCDC40-203ENST00000374877 LRIG2O94898 1065 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 ALDOCP09972 364 aaKnown RBP11.09□□□□□ -0.63
CCDC40-203ENST00000374877 FAM163BP0C2L3 166 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 ZNF182P17025 639 aaPredicted RBP11.09□□□□□ -0.63
CCDC40-203ENST00000374877 PAMP19021 973 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 MAP4P27816 1152 aaKnown RBP11.09□□□□□ -0.63
CCDC40-203ENST00000374877 CHRNA4P43681 627 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 PFKPQ01813 784 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 POU4F1Q01851 419 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 RELAQ04206 551 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 CYP51A1Q16850 503 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 NEPROQ6NW34 567 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 DHRSXQ8N5I4 330 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 DNAJC5GQ8N7S2 189 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 MAGEE2Q8TD90 523 aaPredicted RBP11.09□□□□□ -0.63
CCDC40-203ENST00000374877 HDAC10Q969S8 669 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 C19orf60Q96EN9 201 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 CENPNQ96H22 339 aaPredicted RBP11.09□□□□□ -0.63
CCDC40-203ENST00000374877 ZNF560Q96MR9 790 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 FSD1LQ9BXM9 530 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 TKTL2Q9H0I9 626 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 WDCPQ9H6R7 721 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 TBC1D13Q9NVG8 400 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 FBXW11Q9UKB1 542 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 KANSL1LA0AUZ9 987 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 UBFD1O14562 309 aaKnown RBP11.09□□□□□ -0.63
CCDC40-203ENST00000374877 LTA4HP09960 611 aaKnown RBP11.09□□□□□ -0.63
CCDC40-203ENST00000374877 MTHFD1P11586 935 aaKnown RBP11.09□□□□□ -0.63
CCDC40-203ENST00000374877 THPOP40225 353 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 TAF6P49848 677 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 XKR4Q5GH76 650 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 HACD2Q6Y1H2 254 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 DCDC5Q6ZRR9 648 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 CLEC20AQ6ZU45 233 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 BNIPLQ7Z465 357 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 SLC15A3Q8IY34 581 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 NTAN1Q96AB6 310 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 ROPN1LQ96C74 230 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 SLC9A7Q96T83 725 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 HNRNPABQ99729 332 aaKnown RBP11.09□□□□□ -0.63
CCDC40-203ENST00000374877 SIK2Q9H0K1 926 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 ALG9Q9H6U8 611 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 TCAF1Q9Y4C2 921 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 BPTFQ12830 3046 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 FUOMA2VDF0 154 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 AQP12BA6NM10 295 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 K7EPI3 171 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 USP17L7P0C7H9 530 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 CCL5P13501 91 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 TTKP33981 857 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 POLD2P49005 469 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 RPS6KA2Q15349 733 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 PCSK7Q16549 785 aa11.09□□□□□ -0.63
CCDC40-203ENST00000374877 C8orf82Q6P1X6 216 aaPredicted RBP11.09□□□□□ -0.63
CCDC40-203ENST00000374877 LARP4Q71RC2 724 aaKnown RBP eCLIP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms