RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 ASIC4Q96FT7 647 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 HMCESQ96FZ2 354 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 ELMO2Q96JJ3 720 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 LINC00597Q9H2U6 94 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 CXorf56Q9H5V9 222 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 BRD9Q9H8M2 597 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 NT5MQ9NPB1 228 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 MARCH2Q9P0N8 246 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 RAP2CQ9Y3L5 183 aa15.58■□□□□ 0.08
CCDC40-202ENST00000374876 NYNRINQ9P2P1 1898 aaKnown RBP15.57■□□□□ 0.08
CCDC40-202ENST00000374876 HEATR9A2RTY3 570 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 E9PBE3 544 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 DCXO43602 365 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 KLHL41O60662 606 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 PEX11BO96011 259 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 CHRNGP07510 517 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 SBK3P0C264 359 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 SLC12A2P55011 1212 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 ACTR3P61158 418 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 TNK2Q07912 1038 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 ZNF460Q14592 562 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 MARC1Q5VT66 337 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 METTL21CQ5VZV1 264 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 NEPROQ6NW34 567 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 KLHDC10Q6PID8 442 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 KDELC1Q6UW63 502 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 CEP97Q8IW35 865 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 IMP4Q96G21 291 aaKnown RBP15.57■□□□□ 0.08
CCDC40-202ENST00000374876 PANX3Q96QZ0 392 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 SP110Q9HB58 689 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 TCF7L2Q9NQB0 619 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 TMEM248Q9NWD8 314 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 XPR1Q9UBH6 696 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 FBXO5Q9UKT4 447 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 DUSP12Q9UNI6 340 aa15.57■□□□□ 0.08
CCDC40-202ENST00000374876 SLC12A8A0AV02 714 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 J3KR12 359 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 SRFP11831 508 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 ATP6V1C1P21283 382 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 MPSTP25325 297 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 SERPINH1P50454 418 aaKnown RBP15.56■□□□□ 0.08
CCDC40-202ENST00000374876 RPL14P50914 215 aaKnown RBP15.56■□□□□ 0.08
CCDC40-202ENST00000374876 HK2P52789 917 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 NAGLUP54802 743 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 ZXDAP98168 799 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 ASPHQ12797 758 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 ZRSR2Q15696 482 aaKnown RBP15.56■□□□□ 0.08
CCDC40-202ENST00000374876 SEL1L3Q68CR1 1132 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 LRRC74BQ6ZQY2 392 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 ZNF683Q8IZ20 524 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 PHTF2Q8N3S3 785 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 GABPB2Q8TAK5 448 aaPredicted RBP15.56■□□□□ 0.08
CCDC40-202ENST00000374876 MAPK15Q8TD08 544 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 BTN2A3PQ96KV6 586 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 CDK5RAP1Q96SZ6 601 aaKnown RBP15.56■□□□□ 0.08
CCDC40-202ENST00000374876 SHCBP1LQ9BZQ2 653 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 VPS45Q9NRW7 570 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 NMRK1Q9NWW6 199 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 THG1LQ9NWX6 298 aaKnown RBP15.56■□□□□ 0.08
CCDC40-202ENST00000374876 ZNF212Q9UDV6 495 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 ANGPTL2Q9UKU9 493 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 WNT6Q9Y6F9 365 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 HELZP42694 1942 aaKnown RBP15.56■□□□□ 0.08
CCDC40-202ENST00000374876 A0A087X1B8 175 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 A0A088AWK7 358 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 LOC100653049A0A140TA62 436 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 MATN2O00339 956 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 HDAC3O15379 428 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 KRT34O76011 436 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 CNTN5O94779 1100 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 PIGNO95427 931 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 CD86P42081 329 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 MAXP61244 160 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 POU4F1Q01851 419 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 SLC10A7Q0GE19 358 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 PRKAA1Q13131 559 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 ALFQ53S48 1182 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 CMPK2Q5EBM0 449 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 ARL13AQ5H913 290 aaPredicted RBP15.56■□□□□ 0.08
CCDC40-202ENST00000374876 KIAA0408Q6ZU52 694 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 FATE1Q969F0 183 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 NXNL1Q96CM4 212 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 MOCOSQ96EN8 888 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 EBF3Q9H4W6 596 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 EPHX3Q9H6B9 360 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 ARNT2Q9HBZ2 717 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 ACSS2Q9NR19 701 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 OLA1Q9NTK5 396 aaKnown RBP15.56■□□□□ 0.08
CCDC40-202ENST00000374876 GTSE1Q9NYZ3 720 aa15.56■□□□□ 0.08
CCDC40-202ENST00000374876 ACADSP16219 412 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 PRDX6P30041 224 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 KPNA2P52292 529 aaKnown RBP15.55■□□□□ 0.08
CCDC40-202ENST00000374876 TAS2R39P59534 338 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 TRIP4Q15650 581 aaPredicted RBP15.55■□□□□ 0.08
CCDC40-202ENST00000374876 ARMC3Q5W041 872 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 RAP1GAP2Q684P5 730 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 SPATA6LQ8N4H0 392 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 PPFIBP2Q8ND30 876 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 CALML6Q8TD86 181 aa15.55■□□□□ 0.08
CCDC40-202ENST00000374876 NRG4Q8WWG1 115 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms