RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 CD84Q9UIB8 345 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 KLF15Q9UIH9 416 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 SHOC2Q9UQ13 582 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 ZNF148Q9UQR1 794 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 BTBD3Q9Y2F9 522 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 SPO11Q9Y5K1 396 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 KNL1Q8NG31 2342 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 GIPC1O14908 333 aa20.95■□□□□ 0.94
MAP1LC3A-202ENST00000374837 SDC3O75056 442 aa20.95■□□□□ 0.94
MAP1LC3A-202ENST00000374837 AGTP01019 485 aa20.95■□□□□ 0.94
MAP1LC3A-202ENST00000374837 ADRB1P08588 477 aa20.95■□□□□ 0.94
MAP1LC3A-202ENST00000374837 MSNP26038 577 aaKnown RBP20.95■□□□□ 0.94
MAP1LC3A-202ENST00000374837 NOVA1P51513 510 aaKnown RBP20.95■□□□□ 0.94
MAP1LC3A-202ENST00000374837 PARP6Q2NL67 630 aa20.95■□□□□ 0.94
MAP1LC3A-202ENST00000374837 KANSL1Q7Z3B3 1105 aa20.95■□□□□ 0.94
MAP1LC3A-202ENST00000374837 RAVER1Q8IY67 606 aaKnown RBP20.95■□□□□ 0.94
MAP1LC3A-202ENST00000374837 NRSN1Q8IZ57 195 aa20.95■□□□□ 0.94
MAP1LC3A-202ENST00000374837 CCHCR1Q8TD31 782 aa20.95■□□□□ 0.94
MAP1LC3A-202ENST00000374837 SCAMP4Q969E2 229 aa20.95■□□□□ 0.94
MAP1LC3A-202ENST00000374837 FUBP1Q96AE4 644 aaKnown RBP20.95■□□□□ 0.94
MAP1LC3A-202ENST00000374837 RTP4Q96DX8 246 aa20.95■□□□□ 0.94
MAP1LC3A-202ENST00000374837 ZFYVE1Q9HBF4 777 aa20.95■□□□□ 0.94
MAP1LC3A-202ENST00000374837 PNMA8BQ9ULN7 279 aaPredicted RBP20.95■□□□□ 0.94
MAP1LC3A-202ENST00000374837 AAR2Q9Y312 384 aaKnown RBP20.95■□□□□ 0.94
MAP1LC3A-202ENST00000374837 CHD6Q8TD26 2715 aa20.95■□□□□ 0.94
MAP1LC3A-202ENST00000374837 FLRT2O43155 660 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 METTL18O95568 372 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 CSF2P04141 144 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 HOXC4P09017 264 aaPredicted RBP20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 HLA-DPA1P20036 260 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 ADRA1AP35348 466 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 TNNT3P45378 269 aaPredicted RBP20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 SPINT3P49223 89 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 DPTQ07507 201 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 NFATC4Q14934 902 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 SLC1A5Q15758 541 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 MACC1Q6ZN28 852 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 ZNF765Q7L2R6 523 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 TMC3Q7Z5M5 1100 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 NLRP8Q86W28 1048 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 KLHDC8BQ8IXV7 354 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 RASGEF1CQ8N431 466 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 RHBDD1Q8TEB9 315 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 AP2M1Q96CW1 435 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 MS4A14Q96JA4 679 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 SRPK1Q96SB4 655 aaKnown RBP20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 FICDQ9BVA6 458 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 PCOLCE2Q9UKZ9 415 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 ZKSCAN5Q9Y2L8 839 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 ZNF711Q9Y462 761 aa20.94■□□□□ 0.94
MAP1LC3A-202ENST00000374837 CFAP47Q6ZTR5 3102 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 CBFA2T3O75081 653 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 PIAS2O75928 621 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 CEACAM1P13688 526 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 NME1P15531 152 aaKnown RBP20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 TSHRP16473 764 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 HTR1BP28222 390 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 KIAA1024LP59773 190 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 OLIG2Q13516 323 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 P3H1Q32P28 736 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 PPM1JQ5JR12 505 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 PSAPL1Q6NUJ1 521 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 DRICH1Q6PGQ1 229 aaPredicted RBP20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 ENPP7Q6UWV6 458 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 RANBP10Q6VN20 620 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 NYAP1Q6ZVC0 841 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 SLC25A45Q8N413 288 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 COG1Q8WTW3 980 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 PPP1R2P1Q96PQ5 205 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 WDR24Q96S15 920 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 AGAP2Q99490 1192 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 RIOK2Q9BVS4 552 aaKnown RBP20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 LGR4Q9BXB1 951 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 FSD1LQ9BXM9 530 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 GPR63Q9BZJ6 419 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 WDR26Q9H7D7 661 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 UCKL1Q9NWZ5 548 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 PKD2L2Q9NZM6 624 aa20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 DRG1Q9Y295 367 aaKnown RBP20.93■□□□□ 0.94
MAP1LC3A-202ENST00000374837 RGSL1A5PLK6 1076 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 GOLGA6CA6NDK9 693 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 GOLGA6BA6NDN3 693 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 CACNB4O00305 520 aaPredicted RBP20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 AURKAO14965 403 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 IFNB1P01574 187 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 FGF1P05230 155 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 GOLGA6DP0CG33 693 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 JUNDP17535 347 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 KCNA4P22459 653 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 DGKAP23743 735 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 TEAD1P28347 426 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 GRK6P43250 576 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 GPR1P46091 355 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 GNG11P61952 73 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 HNRNPKP61978 463 aaKnown RBP eCLIP20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 SPARCL1Q14515 664 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 FAXCQ5TGI0 409 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 RAET1GQ6H3X3 334 aa20.92■□□□□ 0.94
MAP1LC3A-202ENST00000374837 PRUNE1Q86TP1 453 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms