RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 PCGF5Q86SE9 256 aa11.35□□□□□ -0.59
HSPG2-202ENST00000374676 OR52K1Q8NGK4 314 aa11.35□□□□□ -0.59
HSPG2-202ENST00000374676 DTX3LQ8TDB6 740 aa11.35□□□□□ -0.59
HSPG2-202ENST00000374676 BLOC1S5Q8TDH9 187 aa11.35□□□□□ -0.59
HSPG2-202ENST00000374676 SKA1Q96BD8 255 aa11.35□□□□□ -0.59
HSPG2-202ENST00000374676 BMFQ96LC9 184 aa11.35□□□□□ -0.59
HSPG2-202ENST00000374676 SLC6A18Q96N87 628 aa11.35□□□□□ -0.59
HSPG2-202ENST00000374676 ABCG8Q9H221 673 aa11.35□□□□□ -0.59
HSPG2-202ENST00000374676 CAPN10Q9HC96 672 aa11.35□□□□□ -0.59
HSPG2-202ENST00000374676 PKD2L2Q9NZM6 624 aa11.35□□□□□ -0.59
HSPG2-202ENST00000374676 IL17CQ9P0M4 197 aa11.35□□□□□ -0.59
HSPG2-202ENST00000374676 NCDNQ9UBB6 729 aa11.35□□□□□ -0.59
HSPG2-202ENST00000374676 ASIC3Q9UHC3 531 aa11.35□□□□□ -0.59
HSPG2-202ENST00000374676 SLC6A14Q9UN76 642 aa11.35□□□□□ -0.59
HSPG2-202ENST00000374676 MYLKQ15746 1914 aa11.35□□□□□ -0.59
HSPG2-202ENST00000374676 ADAMTS9Q9P2N4 1935 aa11.35□□□□□ -0.59
HSPG2-202ENST00000374676 ATXN2Q99700 1313 aaKnown RBP11.35□□□□□ -0.59
HSPG2-202ENST00000374676 TP53BP1Q12888 1972 aaPredicted RBP11.34□□□□□ -0.59
HSPG2-202ENST00000374676 CEP250Q9BV73 2442 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 TCRBV7S3A2A0A539 114 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 POM121BA6NF01 834 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 C2orf81A6NN90 581 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 SMAPO00193 183 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 DNALI1O14645 258 aaPredicted RBP11.34□□□□□ -0.59
HSPG2-202ENST00000374676 VILLO15195 856 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 MAGEC1O60732 1142 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 CRTAMO95727 393 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 WNT1P04628 370 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 PYGLP06737 847 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 HOXC4P09017 264 aaPredicted RBP11.34□□□□□ -0.59
HSPG2-202ENST00000374676 MLNP12872 115 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 TPH1P17752 444 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 LPOP22079 712 aaPredicted RBP11.34□□□□□ -0.59
HSPG2-202ENST00000374676 TRIM23P36406 574 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 GRIA1P42261 906 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 NPY2RP49146 381 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 CSNK1EP49674 416 aaKnown RBP11.34□□□□□ -0.59
HSPG2-202ENST00000374676 PFN3P60673 137 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 YPEL5P62699 121 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 PDE1BQ01064 536 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 MTM1Q13496 603 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 LAMB3Q13751 1172 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 IRF4Q15306 451 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 KCTD19Q17RG1 926 aaPredicted RBP11.34□□□□□ -0.59
HSPG2-202ENST00000374676 RNASEH2BQ5TBB1 312 aaKnown RBP11.34□□□□□ -0.59
HSPG2-202ENST00000374676 ANKRD22Q5VYY1 191 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 ARMC3Q5W041 872 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 ZDHHC20Q5W0Z9 365 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 ESRP1Q6NXG1 681 aaKnown RBP11.34□□□□□ -0.59
HSPG2-202ENST00000374676 KYAT3Q6YP21 454 aaKnown RBP11.34□□□□□ -0.59
HSPG2-202ENST00000374676 GCNT7Q6ZNI0 430 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 RFLNAQ6ZTI6 216 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 GLT6D1Q7Z4J2 308 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 HOOK3Q86VS8 718 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 DCP2Q8IU60 420 aaKnown RBP11.34□□□□□ -0.59
HSPG2-202ENST00000374676 PPIL6Q8IXY8 311 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 MMGT1Q8N4V1 131 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 CEP112Q8N8E3 955 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 NAT8LQ8N9F0 302 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 DNAAF3Q8N9W5 541 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 AP2M1Q96CW1 435 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 NUS1Q96E22 293 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 KLHDC7BQ96G42 594 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 FAM83DQ9H4H8 585 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 FZD3Q9NPG1 666 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 MBNL1Q9NR56 388 aaKnown RBP11.34□□□□□ -0.59
HSPG2-202ENST00000374676 AASDHPPTQ9NRN7 309 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.34□□□□□ -0.59
HSPG2-202ENST00000374676 CA5BQ9Y2D0 317 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 TDRD6O60522 2096 aaKnown RBP11.34□□□□□ -0.59
HSPG2-202ENST00000374676 PCDH15Q96QU1 1955 aa11.34□□□□□ -0.59
HSPG2-202ENST00000374676 CTAGE15A4D2H0 777 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 A6NNZ2 444 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 TLR4O00206 839 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 NDC80O14777 642 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 KHNYNO15037 678 aaKnown RBP11.33□□□□□ -0.6
HSPG2-202ENST00000374676 STX7O15400 261 aaKnown RBP11.33□□□□□ -0.6
HSPG2-202ENST00000374676 RAD51CO43502 376 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 LDB2O43679 373 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 FOXD2O60548 495 aaPredicted RBP11.33□□□□□ -0.6
HSPG2-202ENST00000374676 TMEM63AO94886 807 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 CTAGE8P0CG41 777 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 TSHRP16473 764 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 BPIP17213 487 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 TGM1P22735 817 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 ADRA1DP25100 572 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 PSMA3P25788 255 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 IGFALSP35858 605 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 RABIFP47224 123 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 CLDN2P57739 230 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 DCDC1P59894 354 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 CSRP2Q16527 193 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 TRIM61Q5EBN2 209 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 CERCAMQ5T4B2 595 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 PNCKQ6P2M8 343 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 Q6ZSR6 202 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 ZNF534Q76KX8 674 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 NLRP9Q7RTR0 991 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 ASCL5Q7RTU5 278 aa11.33□□□□□ -0.6
HSPG2-202ENST00000374676 CTAGE6Q86UF2 777 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms