RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 OR1G1P47890 313 aa13.94□□□□□ -0.18
HMGCL-203ENST00000374490 HERVK_113P63132 956 aa13.94□□□□□ -0.18
HMGCL-203ENST00000374490 TRIM25Q14258 630 aaKnown RBP13.94□□□□□ -0.18
HMGCL-203ENST00000374490 DDR2Q16832 855 aa13.94□□□□□ -0.18
HMGCL-203ENST00000374490 CTXN3Q4LDR2 81 aa13.94□□□□□ -0.18
HMGCL-203ENST00000374490 AGKQ53H12 422 aa13.94□□□□□ -0.18
HMGCL-203ENST00000374490 ZNF789Q5FWF6 425 aa13.94□□□□□ -0.18
HMGCL-203ENST00000374490 VARS2Q5ST30 1063 aaKnown RBP13.94□□□□□ -0.18
HMGCL-203ENST00000374490 RAP1GAP2Q684P5 730 aa13.94□□□□□ -0.18
HMGCL-203ENST00000374490 UGT2A3Q6UWM9 527 aa13.94□□□□□ -0.18
HMGCL-203ENST00000374490 TICAM1Q8IUC6 712 aa13.94□□□□□ -0.18
HMGCL-203ENST00000374490 CLYBLQ8N0X4 340 aa13.94□□□□□ -0.18
HMGCL-203ENST00000374490 RHEBL1Q8TAI7 183 aa13.94□□□□□ -0.18
HMGCL-203ENST00000374490 USP13Q92995 863 aaPredicted RBP13.94□□□□□ -0.18
HMGCL-203ENST00000374490 ROPN1LQ96C74 230 aa13.94□□□□□ -0.18
HMGCL-203ENST00000374490 TIFAQ96CG3 184 aa13.94□□□□□ -0.18
HMGCL-203ENST00000374490 DUS3LQ96G46 650 aaKnown RBP13.94□□□□□ -0.18
HMGCL-203ENST00000374490 SPATA17Q96L03 361 aa13.94□□□□□ -0.18
HMGCL-203ENST00000374490 RPRD1AQ96P16 312 aaPredicted RBP13.94□□□□□ -0.18
HMGCL-203ENST00000374490 CDK5RAP1Q96SZ6 601 aaKnown RBP13.94□□□□□ -0.18
HMGCL-203ENST00000374490 ERVK-6Q9BXR3 956 aa13.94□□□□□ -0.18
HMGCL-203ENST00000374490 INTS10Q9NVR2 710 aaKnown RBP13.94□□□□□ -0.18
HMGCL-203ENST00000374490 CACNA2D2Q9NY47 1150 aa13.94□□□□□ -0.18
HMGCL-203ENST00000374490 PCDHGA7Q9Y5G6 932 aa13.94□□□□□ -0.18
HMGCL-203ENST00000374490 MYO16Q9Y6X6 1858 aa13.94□□□□□ -0.18
HMGCL-203ENST00000374490 C15orf38-AP3S2A0A0A6YYH1 394 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 SLC12A8A0AV02 714 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 CCDC189A1A4V9 331 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 CAPN8A6NHC0 703 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 ENO4A6NNW6 628 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 ENPP3O14638 875 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 MRASO14807 208 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 UPP2O95045 317 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 PABPC4LP0CB38 370 aaKnown RBP13.93□□□□□ -0.18
HMGCL-203ENST00000374490 CD1DP15813 335 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 KCNA5P22460 613 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 DPP6P42658 865 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 CDKN2DP55273 166 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 MS4A2Q01362 244 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 LRP8Q14114 963 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 UNC50Q53HI1 259 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 SAMD4BQ5PRF9 694 aaKnown RBP13.93□□□□□ -0.18
HMGCL-203ENST00000374490 C10orf120Q5SQS8 335 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 FOXB2Q5VYV0 432 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 ALG1LQ6GMV1 187 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 PRMT9Q6P2P2 845 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 ARPINQ7Z6K5 226 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 ISCA2Q86U28 154 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 ZNF280BQ86YH2 543 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 PGBD5Q8N414 524 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 PCYOX1LQ8NBM8 494 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 BRSK1Q8TDC3 778 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 ZNF483Q8TF39 744 aaPredicted RBP13.93□□□□□ -0.18
HMGCL-203ENST00000374490 ANKRD49Q8WVL7 239 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 IGSF8Q969P0 613 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 SCLYQ96I15 445 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 SEMA3CQ99985 751 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 EFHD1Q9BUP0 239 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 TRIM4Q9C037 500 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 UNKQ9C0B0 810 aaKnown RBP13.93□□□□□ -0.18
HMGCL-203ENST00000374490 TFB2MQ9H5Q4 396 aaKnown RBP13.93□□□□□ -0.18
HMGCL-203ENST00000374490 ZNF576Q9H609 170 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 ALG9Q9H6U8 611 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 SYTL2Q9HCH5 934 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 SPAG4Q9NPE6 437 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 CROTQ9UKG9 612 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 SCN5AQ14524 2016 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 NUP205Q92621 2012 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 MYLKQ15746 1914 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 F8W810 466 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 TRIM24O15164 1050 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 CD3EAPO15446 510 aaKnown RBP13.93□□□□□ -0.18
HMGCL-203ENST00000374490 VPS4BO75351 444 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 SUPT7LO94864 414 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 NDST3O95803 873 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 GOT2P00505 430 aaKnown RBP13.93□□□□□ -0.18
HMGCL-203ENST00000374490 FGF4P08620 206 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 TACR2P21452 398 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 GPR15P49685 360 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 ARSDP51689 593 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 MRPL58Q14197 206 aaKnown RBP13.93□□□□□ -0.18
HMGCL-203ENST00000374490 GRIN2CQ14957 1233 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 TYSND1Q2T9J0 566 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 C5orf22Q49AR2 442 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 GPR158Q5T848 1215 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 RASIP1Q5U651 963 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 SDHAF4Q5VUM1 108 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 CWF19L1Q69YN2 538 aaKnown RBP13.93□□□□□ -0.18
HMGCL-203ENST00000374490 PSRC1Q6PGN9 363 aaPredicted RBP13.93□□□□□ -0.18
HMGCL-203ENST00000374490 EFL1Q7Z2Z2 1120 aaKnown RBP13.93□□□□□ -0.18
HMGCL-203ENST00000374490 SPATA24Q86W54 205 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 AHI1Q8N157 1196 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 PHC3Q8NDX5 983 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 C2orf15Q8WU43 125 aaKnown RBP13.93□□□□□ -0.18
HMGCL-203ENST00000374490 NCSTNQ92542 709 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 PBXIP1Q96AQ6 731 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 PHF21BQ96EK2 531 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 C19orf60Q96EN9 201 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 GCNAQ96QF7 691 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 CYP2S1Q96SQ9 504 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms