RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 PCDH10Q9P2E7 1040 aa17.68■□□□□ 0.42
TRAF3IP1-201ENST00000373327 MARCH4Q9P2E8 410 aaPredicted RBP17.68■□□□□ 0.42
TRAF3IP1-201ENST00000373327 FCF1Q9Y324 198 aaKnown RBP17.68■□□□□ 0.42
TRAF3IP1-201ENST00000373327 E7ENX8 843 aa17.68■□□□□ 0.42
TRAF3IP1-201ENST00000373327 ESRRBO95718 433 aa17.68■□□□□ 0.42
TRAF3IP1-201ENST00000373327 RHOQP17081 205 aa17.68■□□□□ 0.42
TRAF3IP1-201ENST00000373327 FASP25445 335 aa17.68■□□□□ 0.42
TRAF3IP1-201ENST00000373327 HNRNPDQ14103 355 aaKnown RBP17.68■□□□□ 0.42
TRAF3IP1-201ENST00000373327 CLYBLQ8N0X4 340 aa17.68■□□□□ 0.42
TRAF3IP1-201ENST00000373327 TWIST2Q8WVJ9 160 aa17.68■□□□□ 0.42
TRAF3IP1-201ENST00000373327 RTP4Q96DX8 246 aa17.68■□□□□ 0.42
TRAF3IP1-201ENST00000373327 SLC2A13Q96QE2 648 aa17.68■□□□□ 0.42
TRAF3IP1-201ENST00000373327 SF3B1O75533 1304 aaKnown RBP eCLIP17.68■□□□□ 0.426e-13■■■■■ 155.1
TRAF3IP1-201ENST00000373327 SYNDIG1LA6NDD5 238 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 CLOCKO15516 846 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 SEPT4O43236 478 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 LRATO95237 230 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 CNPP09543 421 aaKnown RBP17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 LAMB3Q13751 1172 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 EPGNQ6UW88 154 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 MAMDC4Q6UXC1 1216 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 SIDT2Q8NBJ9 832 aaKnown RBP17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 TRIB2Q92519 343 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 TNKS2Q9H2K2 1166 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 LIMD1Q9UGP4 676 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 BRWD3Q6RI45 1802 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 PRR23AA6NEV1 266 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 MGEA5O60502 916 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 CPSF4O95639 269 aaKnown RBP17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 HSPA1AP0DMV8 641 aaKnown RBP17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 HSPA1BP0DMV9 641 aaKnown RBP17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 ZNF135P52742 658 aaPredicted RBP17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 USP46P62068 366 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 SP3Q02447 781 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 SQLEQ14534 574 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 PLCL1Q15111 1095 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 TMEM135Q86UB9 458 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 PRDM16Q9HAZ2 1276 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 ADAMTS6Q9UKP5 1117 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 LRRC42Q9Y546 428 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 SNAP91O60641 907 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 FYNP06241 537 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 ITGALP20701 1170 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 HALP42357 657 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 LPIN1Q14693 890 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 IL23RQ5VWK5 629 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 CLVS1Q8IUQ0 354 aaPredicted RBP17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 NSUN5Q96P11 429 aaKnown RBP17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 PHF12Q96QT6 1004 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 H7C4K7 107 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 CYBBP04839 570 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 MAP4P27816 1152 aaKnown RBP17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 SCNN1AP37088 669 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 RPL38P63173 70 aaKnown RBP17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 MSLNQ13421 630 aaPredicted RBP17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 TIFABQ6ZNK6 161 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 RDH11Q8TC12 318 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 IGSF8Q969P0 613 aa17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 EIF2B4Q9UI10 523 aaKnown RBP17.67■□□□□ 0.42
TRAF3IP1-201ENST00000373327 CCDC189A1A4V9 331 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 PDLIM1O00151 329 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 PRKAA2P54646 552 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 SLC44A2Q8IWA5 706 aaPredicted RBP17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 FAM47BQ8NA70 645 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 CD99L2Q8TCZ2 262 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 NSMCE2Q96MF7 247 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 STK39Q9UEW8 545 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 EVLQ9UI08 416 aaPredicted RBP17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 RAI2Q9Y5P3 530 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 U3KQV3 271 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 NUMA1Q14980 2115 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 PTGES3LE9PB15 166 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 MATN2O00339 956 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 SERPIND1P05546 499 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 REP15Q6BDI9 236 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 LPCAT2Q7L5N7 544 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 IFNL1Q8IU54 200 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 RMND5BQ96G75 393 aaPredicted RBP17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 KIF17Q9P2E2 1029 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 MTHFD1P11586 935 aaKnown RBP17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 GNA12Q03113 381 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 TCEA2Q15560 299 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 AP5B1Q2VPB7 878 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 AAGABQ6PD74 315 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 C16orf87Q6PH81 154 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 OFCC1Q8IZS5 231 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 OR56A4Q8NGH8 313 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 IRGQQ8WZA9 623 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 SORT1Q99523 831 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 OLFM1Q99784 485 aa17.66■□□□□ 0.42
TRAF3IP1-201ENST00000373327 TRAFD1O14545 582 aaPredicted RBP17.65■□□□□ 0.42
TRAF3IP1-201ENST00000373327 SNNO75324 88 aaPredicted RBP17.65■□□□□ 0.42
TRAF3IP1-201ENST00000373327 GSNP06396 782 aa17.65■□□□□ 0.42
TRAF3IP1-201ENST00000373327 ABCB1P08183 1280 aaPredicted RBP17.65■□□□□ 0.42
TRAF3IP1-201ENST00000373327 CHRNB3Q05901 458 aa17.65■□□□□ 0.42
TRAF3IP1-201ENST00000373327 LRRC74AQ0VAA2 488 aa17.65■□□□□ 0.42
TRAF3IP1-201ENST00000373327 DYNC1I2Q13409 638 aaKnown RBP17.65■□□□□ 0.42
TRAF3IP1-201ENST00000373327 SLC5A9Q2M3M2 681 aa17.65■□□□□ 0.42
TRAF3IP1-201ENST00000373327 MS4A13Q5J8X5 152 aa17.65■□□□□ 0.42
TRAF3IP1-201ENST00000373327 ZFP1Q6P2D0 407 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms