RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 TRIM64A6NGJ6 449 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 ARL5CA6NH57 179 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 UBXN8O00124 270 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 CD3EAPO15446 510 aaKnown RBP10.88□□□□□ -0.67
LCN2-202ENST00000372998 KERAO60938 352 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 DNAJB5O75953 348 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 JUNP05412 331 aaKnown RBP10.88□□□□□ -0.67
LCN2-202ENST00000372998 UROSP10746 265 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 CD1DP15813 335 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 HTR1EP28566 365 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 EPHX2P34913 555 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 GMPRP36959 345 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 GRIA3P42263 894 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 CCR10P46092 362 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 ADARP55265 1226 aaKnown RBP10.88□□□□□ -0.67
LCN2-202ENST00000372998 TBX4P57082 545 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 C1QTNF8P60827 252 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 MERTKQ12866 999 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 SPIDRQ14159 915 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 LPIN1Q14693 890 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 SMAD1Q15797 465 aaKnown RBP10.88□□□□□ -0.67
LCN2-202ENST00000372998 ATP6AP1Q15904 470 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 SMU1Q2TAY7 513 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 PDCD4Q53EL6 469 aaKnown RBP10.88□□□□□ -0.67
LCN2-202ENST00000372998 TIGD5Q53EQ6 642 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 C6orf10Q5SRN2 563 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 FAM182AQ5T1J6 154 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 RBM20Q5T481 1227 aaKnown RBP10.88□□□□□ -0.67
LCN2-202ENST00000372998 UGT3A1Q6NUS8 523 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 PATL1Q86TB9 770 aaKnown RBP10.88□□□□□ -0.67
LCN2-202ENST00000372998 NLRC5Q86WI3 1866 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 RNF135Q8IUD6 432 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 DHRSXQ8N5I4 330 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 RNF148Q8N7C7 305 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 BRSK1Q8TDC3 778 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 TWIST2Q8WVJ9 160 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 KIAA1191Q96A73 305 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 SLCO4A1Q96BD0 722 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 BTN2A3PQ96KV6 586 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 C8orf48Q96LL4 319 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 CDK5RAP1Q96SZ6 601 aaKnown RBP10.88□□□□□ -0.67
LCN2-202ENST00000372998 OLFM1Q99784 485 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 AARSD1Q9BTE6 412 aaKnown RBP10.88□□□□□ -0.67
LCN2-202ENST00000372998 OSBPL6Q9BZF3 934 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 HIPK3Q9H422 1215 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 NOL11Q9H8H0 719 aaKnown RBP10.88□□□□□ -0.67
LCN2-202ENST00000372998 AKTIPQ9H8T0 292 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 MID1IP1Q9NPA3 183 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 NT5MQ9NPB1 228 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 CATSPERZQ9NTU4 200 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 SLC2A6Q9UGQ3 507 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 MAGEL2Q9UJ55 1249 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 ANAPC2Q9UJX6 822 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 CDH7Q9ULB5 785 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 ST3GAL5Q9UNP4 418 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 RNF11Q9Y3C5 154 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 FIS1Q9Y3D6 152 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 MYO16Q9Y6X6 1858 aa10.88□□□□□ -0.67
LCN2-202ENST00000372998 DOCK4Q8N1I0 1966 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 IGLV3-10A0A075B6K4 115 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 LCHNA4D1U4 455 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 IQCA1LA6NCM1 817 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 C16orf96A6NNT2 1141 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 TMEM233B4DJY2 109 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 NR5A2O00482 541 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 INPPL1O15357 1258 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 CBFA2T3O75081 653 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 EEDO75530 441 aaKnown RBP10.87□□□□□ -0.67
LCN2-202ENST00000372998 ESRRBO95718 433 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 LDLRP01130 860 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 CDK4P11802 303 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 GFAPP14136 432 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 GJA5P36382 358 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 GRIK1P39086 918 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 CAPGP40121 348 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 MAGEA11P43364 429 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 SMARCB1Q12824 385 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 TUBA3CQ13748 450 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 ZNF460Q14592 562 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 TRIP4Q15650 581 aaPredicted RBP10.87□□□□□ -0.67
LCN2-202ENST00000372998 NRF1Q16656 503 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 TYSND1Q2T9J0 566 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 UGT3A2Q3SY77 523 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 SLC36A3Q495N2 470 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 AARS2Q5JTZ9 985 aaKnown RBP10.87□□□□□ -0.67
LCN2-202ENST00000372998 BLOC1S3Q6QNY0 202 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 AFTPHQ6ULP2 937 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 AMIGO2Q86SJ2 522 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 EGFL6Q8IUX8 553 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 FBXO39Q8N4B4 442 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 FIBCD1Q8N539 461 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 PTGR2Q8N8N7 351 aaPredicted RBP10.87□□□□□ -0.67
LCN2-202ENST00000372998 OR56A4Q8NGH8 313 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 DNAJB8Q8NHS0 232 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 NPLOC4Q8TAT6 608 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 RSPH1Q8WYR4 309 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 HDAC10Q969S8 669 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 TUBGCP3Q96CW5 907 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 LRRC58Q96CX6 371 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 PHF21BQ96EK2 531 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms