RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 LRATO95237 230 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 ALOX5P09917 674 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 NUDT17P0C025 328 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 GRM5P41594 1212 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 SSR2P43308 183 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 MBTD1Q05BQ5 628 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 PERM1Q5SV97 790 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 CXCL17Q6UXB2 119 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 FAM151BQ6UXP7 276 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 SGK2Q9HBY8 427 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 DIP2AQ14689 1571 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 CYP3A7-CYP3A51PA0A087WV96 503 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 ERCC2P18074 760 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 CYP3A7P24462 503 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 ITPKBP27987 946 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 MNDAP41218 407 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 RTL4Q6ZR62 310 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 KCNK18Q7Z418 384 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 TBC1D21Q8IYX1 336 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 HDAC10Q969S8 669 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 AARSD1Q9BTE6 412 aaKnown RBP11.53□□□□□ -0.56
VCL-202ENST00000372755 TRIM39Q9HCM9 518 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 DDX4Q9NQI0 724 aaKnown RBP11.53□□□□□ -0.56
VCL-202ENST00000372755 A0A0X1KG70 313 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 PLOD3O60568 738 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 TSPAN8P19075 237 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 PTPN5P54829 565 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 MYBPC3Q14896 1274 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 DACT2Q5SW24 774 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 ISLR2Q6UXK2 745 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 PHYKPLQ8IUZ5 450 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 C10orf107Q8IVU9 208 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 AGAP11Q8TF27 550 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 KAZALD1Q96I82 304 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 CLIC5Q9NZA1 410 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 PCDHB1Q9Y5F3 818 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 AGRPO00253 132 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 PAX7P23759 505 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 CTBP1Q13363 440 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 TSC22D1Q15714 1073 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 APOBEC3HQ6NTF7 200 aaKnown RBP11.53□□□□□ -0.56
VCL-202ENST00000372755 SH3RF1Q7Z6J0 888 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 NWD1Q149M9 1564 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 RPTORQ8N122 1335 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 LRRC10BA6NIK2 292 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 PSIP1O75475 530 aaKnown RBP11.53□□□□□ -0.56
VCL-202ENST00000372755 KRT36O76013 467 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 TGDSO95455 350 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 CCR3P51677 355 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 NOMO3P69849 1222 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 FMO1Q01740 532 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 FOLH1Q04609 750 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 CAPSQ13938 189 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 VGLL4Q14135 290 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 LLGL2Q6P1M3 1020 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 ATG14Q6ZNE5 492 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 OR2T12Q8NG77 320 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 ADAMTS15Q8TE58 950 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 MKL1Q969V6 931 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 MCMBPQ9BTE3 642 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 DHRS7Q9Y394 339 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 RWDD3Q9Y3V2 267 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 CASKO14936 926 aa11.52□□□□□ -0.56
VCL-202ENST00000372755 RBMXL2O75526 392 aaKnown RBP11.52□□□□□ -0.56
VCL-202ENST00000372755 TRBC1P01850 177 aa11.52□□□□□ -0.56
VCL-202ENST00000372755 IFNA6P05013 189 aa11.52□□□□□ -0.56
VCL-202ENST00000372755 HNRNPLP14866 589 aaKnown RBP eCLIP11.52□□□□□ -0.56
VCL-202ENST00000372755 EPHA3P29320 983 aa11.52□□□□□ -0.56
VCL-202ENST00000372755 ABATP80404 500 aa11.52□□□□□ -0.56
VCL-202ENST00000372755 SUZ12Q15022 739 aaKnown RBP11.52□□□□□ -0.56
VCL-202ENST00000372755 NDUFA9Q16795 377 aa11.52□□□□□ -0.56
VCL-202ENST00000372755 GPR107Q5VW38 600 aa11.52□□□□□ -0.56
VCL-202ENST00000372755 CRTC3Q6UUV7 619 aa11.52□□□□□ -0.56
VCL-202ENST00000372755 GPR135Q8IZ08 494 aa11.52□□□□□ -0.56
VCL-202ENST00000372755 TRMT13Q9NUP7 481 aaKnown RBP11.52□□□□□ -0.56
VCL-202ENST00000372755 KCTD5Q9NXV2 234 aa11.52□□□□□ -0.56
VCL-202ENST00000372755 SLC27A5Q9Y2P5 690 aa11.52□□□□□ -0.56
VCL-202ENST00000372755 SLIT1O75093 1534 aa11.52□□□□□ -0.56
VCL-202ENST00000372755 DHX15O43143 795 aaKnown RBP11.52□□□□□ -0.57
VCL-202ENST00000372755 TFPIP10646 304 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 MAXP61244 160 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 CUZD1Q86UP6 607 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 FAM35AQ86V20 835 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 MON1AQ86VX9 555 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 TRPV1Q8NER1 839 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 SHC3Q92529 594 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 LGMNQ99538 433 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 TMEM27Q9HBJ8 222 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 MTRRQ9UBK8 725 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 ZNF879B4DU55 563 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 AP5Z1O43299 807 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 TLR5O60602 858 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 WNT3AP56704 352 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 PRR23CQ6ZRP0 262 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 MCEMP1Q8IX19 187 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 C5orf34Q96MH7 638 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 MUC13Q9H3R2 512 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 PHPT1Q9NRX4 125 aaPredicted RBP11.52□□□□□ -0.57
VCL-202ENST00000372755 WBP11Q9Y2W2 641 aaKnown RBP11.52□□□□□ -0.57
VCL-202ENST00000372755 TRAF6Q9Y4K3 522 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms