RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 THOP1P52888 689 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 NR1H2P55055 460 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 SP2Q02086 613 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 TCEA2Q15560 299 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 CCDC142Q17RM4 750 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 MFSD4BQ5TF39 518 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 BRSK1Q8TDC3 778 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 EXOC2Q96KP1 924 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 PNPLA3Q9NST1 481 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 IRAK2O43187 625 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 CCNDBP1O95273 360 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 EIF2S1P05198 315 aaKnown RBP10.48□□□□□ -0.73
NUP188-201ENST00000372577 CTPS1P17812 591 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 LMO2P25791 158 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 USP4Q13107 963 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 TPGS2Q68CL5 300 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 FAM151BQ6UXP7 276 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 PGAM4Q8N0Y7 254 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 DEPDC4Q8N2C3 294 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 ZNF614Q8N883 585 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 SHISA4Q96DD7 197 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 FEM1CQ96JP0 617 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 MARK4Q96L34 752 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 NUSAP1Q9BXS6 441 aaKnown RBP10.48□□□□□ -0.73
NUP188-201ENST00000372577 EPB41L4BQ9H329 900 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 BTRCQ9Y297 605 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 PKD1L3Q7Z443 1732 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 CRYBG1Q9Y4K1 1723 aa10.48□□□□□ -0.73
NUP188-201ENST00000372577 ELFN1P0C7U0 828 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 PIRTP0C851 137 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 ST13P50502 369 aaKnown RBP10.47□□□□□ -0.73
NUP188-201ENST00000372577 ITGA1P56199 1179 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 GRB14Q14449 540 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 PDK3Q15120 406 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 TRIM40Q6P9F5 258 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 CLEC20AQ6ZU45 233 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 ZBTB2Q8N680 514 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 TBCDQ9BTW9 1192 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 NMUR2Q9GZQ4 415 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 MRPL42Q9Y6G3 142 aaKnown RBP10.47□□□□□ -0.73
NUP188-201ENST00000372577 ALS2Q96Q42 1657 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 PRR23D1E9PI22 279 aaPredicted RBP10.47□□□□□ -0.73
NUP188-201ENST00000372577 RGS5O15539 181 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 SMNDC1O75940 238 aaKnown RBP eCLIP10.47□□□□□ -0.73
NUP188-201ENST00000372577 PRR23D2P0DMB1 279 aaPredicted RBP10.47□□□□□ -0.73
NUP188-201ENST00000372577 MPSTP25325 297 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 HOXD13P35453 343 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 CXCR3P49682 368 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 CDC42P60953 191 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 DCAF12L1Q5VU92 463 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 FSTL4Q6MZW2 842 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 UBE2R2Q712K3 238 aaPredicted RBP10.47□□□□□ -0.73
NUP188-201ENST00000372577 FBXO30Q8TB52 745 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 BORCS6Q96GS4 357 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 SEMA6AQ9H2E6 1030 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 ASB3Q9Y575 518 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 C10orf71Q711Q0 1435 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 PER2O15055 1255 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 ESR1P03372 595 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 OR4Q2P0C623 313 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 ELNP15502 786 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 MYL12AP19105 171 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 LCP2Q13094 533 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 TAF5Q15542 800 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 SWT1Q5T5J6 900 aaKnown RBP10.47□□□□□ -0.73
NUP188-201ENST00000372577 BROXQ5VW32 411 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 ERICH5Q6P6B1 374 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 CLVS1Q8IUQ0 354 aaPredicted RBP10.47□□□□□ -0.73
NUP188-201ENST00000372577 UNC5BQ8IZJ1 945 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 PYROXD2Q8N2H3 581 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 DNAJB14Q8TBM8 379 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 BRI3BPQ8WY22 251 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 NDRG1Q92597 394 aaKnown RBP10.47□□□□□ -0.73
NUP188-201ENST00000372577 NXNL1Q96CM4 212 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 MTFMTQ96DP5 389 aaKnown RBP10.47□□□□□ -0.73
NUP188-201ENST00000372577 SUSD3Q96L08 255 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 Q96MT0 163 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 VRTNQ9H8Y1 702 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 CACNA2D2Q9NY47 1150 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 ZNF232Q9UNY5 417 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 A0A0J9YYE9 177 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 PIAS1O75925 651 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 FAM155BO75949 473 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 LINC00032P0C843 101 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 CRATP43155 626 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 RPL5P46777 297 aaKnown RBP10.47□□□□□ -0.73
NUP188-201ENST00000372577 PSMD7P51665 324 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 TAF1AQ15573 450 aaPredicted RBP10.47□□□□□ -0.73
NUP188-201ENST00000372577 ZNF792Q3KQV3 632 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 FGD3Q5JSP0 725 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 CROCCP3Q8IVE0 287 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 DEFB118Q96PH6 123 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 TMEM175Q9BSA9 504 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 PTPRHQ9HD43 1115 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 SLC38A8A6NNN8 435 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 YJEFN3A6XGL0 299 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 SIN3BO75182 1162 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 MED26O95402 600 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 TALDO1P37837 337 aa10.47□□□□□ -0.73
NUP188-201ENST00000372577 PTGER3P43115 390 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms